EMLSAP00000000247, EMLSAP00000000247 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000247
Unique NameEMLSAP00000000247
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1239
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1032..1060
NoneNo IPR availableCOILSCoilCoilcoord: 873..908
NoneNo IPR availableCOILSCoilCoilcoord: 682..710
NoneNo IPR availableCOILSCoilCoilcoord: 326..361
NoneNo IPR availableCOILSCoilCoilcoord: 915..936
NoneNo IPR availableCOILSCoilCoilcoord: 208..229
NoneNo IPR availableCOILSCoilCoilcoord: 244..284
NoneNo IPR availableCOILSCoilCoilcoord: 170..191
NoneNo IPR availableCOILSCoilCoilcoord: 845..866
NoneNo IPR availableCOILSCoilCoilcoord: 758..786
NoneNo IPR availableCOILSCoilCoilcoord: 421..470
NoneNo IPR availableGENE3D3.40.50.300coord: 1089..1217
e-value: 8.7E-53
score: 179.1
coord: 1012..1028
e-value: 8.7E-53
score: 179.1
coord: 7..166
e-value: 8.7E-53
score: 179.1
NoneNo IPR availablePANTHERPTHR18937STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBERcoord: 6..1231
IPR024704Structural maintenance of chromosomes proteinPIRSFPIRSF005719SMCcoord: 5..1225
e-value: 4.9E-200
score: 673.7
IPR010935SMCs flexible hingeSMARTSM00968SMC_hingecoord: 519..638
e-value: 1.6E-19
score: 80.8
IPR010935SMCs flexible hingePFAMPF06470SMC_hingecoord: 519..638
e-value: 1.7E-19
score: 69.8
IPR010935SMCs flexible hingeSUPERFAMILY75553Smc hinge domaincoord: 481..688
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 8..1214
e-value: 6.2E-40
score: 136.6
IPR028468Structural maintenance of chromosomes protein 1PANTHERPTHR18937:SF12STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC1coord: 6..1231
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 936..1216
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1124..1212
coord: 8..217

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000247 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000247EMLSAT00000000247-696094Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000247 ID=EMLSAP00000000247|Name=EMLSAP00000000247|organism=Lepeophtheirus salmonis|type=polypeptide|length=1239bp
MQQNRVKLKYIEIENFKSYKGYCKLGPLFGFDAVIGPNGSGKSNFMDAVS
FVMGEKTTCLRVRRLSDLIHGASVGRPVSNRAFVTAIFEFSAPSEEGMSQ
KKFTRSIAGSSSDHKIDNETVSGSTYMRELERLGINVNAKNFLVFQGAVE
SIAMKNPKELTMLFEEIAGSGALKNDYLRLKSEMNEAEENTNSTYQKKKA
IGAERKEAKIEKEEAEKYQKLKDNMADRCVEIQLYRLYHNERAIKEHEVQ
IEKKKKECAKKKKEEVENKLKDVKKDLGKAQRDFAKVDSSIREKENDIQR
LRPEFIKSKERTAHLQKKTEGARKSLKQAEKASKSHQQDIQELERELSDN
LKSKEEFDERTRKEIQSQSKDLRLESGQVEQYLKLKVCAGKESARQMADL
DSINREQKSDQDRLDSEMRKKSKLEHDLKTKGSELEEAQKREERLAEHIR
QSTNQIDEQEKIFNELQGEVGCSRDRVYDIQKELDEVANELGDARVDKHE
ENRRKKKQEIVENFKRLFPGVFDRMINMSQPIHKRYNVAITKQLGRYMEA
IVVDCESTARQCIQYLKDQMLEPETFLPLDYIQARPLKVRLRTIENPKGV
MLLYDVLRYDPPDIKEAVLFVTNNALVCETPEDAMKVAYEMGDNQRYDAV
ALDGTFYQKSGIISGGSMDLARKAKXWXDKQVSTLKVKKEKLTEELKQAM
KNSRKESEIQTIQSQISGLKTRLKYSINDKENTVKKISSLRSSMKKIRTE
LENFVPIIREIENIMRDREVKIEATKEKMNRVEDDIFGDFCEQIGVSDIR
QYEERELKNQQDREKKKLEFENEINRIQSQLEYEGKRAKQLDGNVTKYER
MVQDDEDALEKAKNSEQTQMSEIDNQMREVDRSKKEKSFLKSECDKYEDA
VSEARKDVASVSKSIQSCNKEINMLESNMESERASRHSILKQCKMDIINI
PMTTGNLEDIDEEADDDPSIEVSNSQPSHLIYEKEANIIIDYDNLDDNLK
ELESGDVKAIEESLEKHINELQTRLNRIQAPNMRAMQKLDEARDKLIETN
KEFEVVRKKAKNAKMNFERVKKERHDLFMTCFDHVSNNIDEIYKQLAQNQ
SAQAFLGPENPEEPYLEGINYNCVAPGKRFQPMSNLSGGEKTIAALALLF
AIHSFQPAPFFVLDEIDAALDNTNIGKVASYIEEKTGDEGMNIIVISLKE
EFYHRADSLIGICPDNSMGENADCLVSKVFTLDLRAYPK
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