EMLSAP00000000333, EMLSAP00000000333 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000333
Unique NameEMLSAP00000000333
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length553
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 55..73
score: 46.4
coord: 407..419
score: 42.8
coord: 373..395
score: 33.47
coord: 33..49
score: 40.85
coord: 85..104
score: 47.27
IPR027409GroEL-like apical domainGENE3D3.50.7.10coord: 208..373
e-value: 8.1E-49
score: 165.5
IPR027409GroEL-like apical domainSUPERFAMILY52029GroEL apical domain-likecoord: 206..378
IPR012715T-complex protein 1, alpha subunitTIGRFAMTIGR02340TIGR02340coord: 9..537
e-value: 7.2E-276
score: 913.8
IPR012715T-complex protein 1, alpha subunitPANTHERPTHR11353:SF20CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, ALPHA SUBUNIT, TCPAcoord: 1..552
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 9..139
e-value: 9.2E-86
score: 286.7
coord: 404..532
e-value: 9.2E-86
score: 286.7
IPR002423Chaperonin Cpn60/TCP-1PFAMPF00118Cpn60_TCP1coord: 31..532
e-value: 8.8E-143
score: 476.3
IPR002423Chaperonin Cpn60/TCP-1PANTHERPTHR11353CHAPERONINcoord: 1..552
IPR002423Chaperonin Cpn60/TCP-1SUPERFAMILY48592GroEL equatorial domain-likecoord: 13..142
coord: 405..532
IPR027410TCP-1-like chaperonin intermediate domainGENE3D3.30.260.10coord: 148..207
e-value: 2.6E-27
score: 94.2
coord: 374..403
e-value: 2.6E-27
score: 94.2
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00995TCP1_3coord: 85..93
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00751TCP1_2coord: 57..73
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00750TCP1_1coord: 36..48
NoneNo IPR availableSUPERFAMILY54849GroEL-intermediate domain likecoord: 143..210
coord: 369..404

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000333 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000333EMLSAT00000000333-696180Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000333 ID=EMLSAP00000000333|Name=EMLSAP00000000333|organism=Lepeophtheirus salmonis|type=polypeptide|length=553bp
MSTVSSTLSLQGERRSGQEVRTQNVLAAASISNIVKSSLGPVGLDKMMVD
DIGDITITNDGATILRLLEVEHPSAKVLVELAQLQDEEVGDGTTSVVIIA
AELLKNADELVKQKIHPTSIISGYRLACKEAVKYIQENLTYEVETLGEEA
LINAAKTSMSSKLIGSDKDFFSRMVVDAANAIKMPDGKYPINAVNVLKAV
GKSARESTLIHGYALNCTVAAQQMPKHIKNAKIACLDFSLQKTKLKMGIQ
VLVTDPEQLEAIRDREADITKERIKKIIDAGANVILTTGGIDDLCLKYFT
EAGAMAXRRCKKXDLKRIAKATGAQFVTSLANLEGEETFEASFLGGASEV
AQERICDDELIIIKGTKARTASSIILRGPNYFYLDEMERSVHDALCVVKR
XMESKNVVVGGGAVEAALSIYLENFASSLASREQLAIAEFARSLLVIPKT
LAVNAAQDASDLVAKLRSYHDSSQTKPEHIALKDYGLDLYNGVVLDNKKA
GVFEPSISKIKSLKFATEAAITILRIDDLIKLEPEKGEERSYQQALQSGQ
LDG
back to top
Add to Basket