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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002291 | Phosphorylase kinase, gamma catalytic subunit | PRINTS | PR01049 | PHOSPHBKNASE | coord: 395..410
score: 37.5
coord: 166..187
score: 40.26
coord: 345..360
score: 27.68
coord: 331..342
score: 47.62
coord: 380..394
score: 27.62 |
| IPR001781 | Zinc finger, LIM-type | SMART | SM00132 | LIM | coord: 4..53
e-value: 0.19
score: 5.1
coord: 524..576
e-value: 9.8E-11
score: 51.7 |
| IPR001781 | Zinc finger, LIM-type | PFAM | PF00412 | LIM | coord: 5..33
e-value: 1.3E-4
score: 21.8
coord: 525..581
e-value: 3.9E-13
score: 49.1 |
| IPR001781 | Zinc finger, LIM-type | GENE3D | 2.10.110.10 | | coord: 524..589
e-value: 3.0E-18
score: 65.4
coord: 424..460
e-value: 2.1E-5
score: 24.2
coord: 4..35
e-value: 1.5E-7
score: 31.1 |
| IPR001781 | Zinc finger, LIM-type | PROSITE | PS00478 | LIM_DOMAIN_1 | coord: 525..559 |
| IPR001781 | Zinc finger, LIM-type | PROSITE | PS50023 | LIM_DOMAIN_2 | coord: 3..71
score: 7.791 |
| IPR001781 | Zinc finger, LIM-type | PROSITE | PS50023 | LIM_DOMAIN_2 | coord: 523..583
score: 14.811 |
| IPR002290 | Serine/threonine- /dual specificity protein kinase, catalytic domain | SMART | SM00220 | S_TKc | coord: 69..339
e-value: 4.2E-99
score: 345.2 |
| None | No IPR available | GENE3D | 1.10.510.10 | | coord: 186..341
e-value: 1.1E-55
score: 187.2 |
| None | No IPR available | GENE3D | 3.30.200.20 | | coord: 46..185
e-value: 2.9E-39
score: 134.3 |
| None | No IPR available | PANTHER | PTHR24347:SF48 | PHOSPHORYLASE B KINASE GAMMA CATALYTIC CHAIN-RELATED | coord: 61..407 |
| None | No IPR available | SUPERFAMILY | 57716 | Glucocorticoid receptor-like (DNA-binding domain) | coord: 4..30 |
| None | No IPR available | SUPERFAMILY | 57716 | Glucocorticoid receptor-like (DNA-binding domain) | coord: 552..593 |
| None | No IPR available | SUPERFAMILY | 57716 | Glucocorticoid receptor-like (DNA-binding domain) | coord: 425..469 |
| None | No IPR available | SUPERFAMILY | 57716 | Glucocorticoid receptor-like (DNA-binding domain) | coord: 516..550 |
| IPR000719 | Protein kinase domain | PFAM | PF00069 | Pkinase | coord: 69..337
e-value: 1.7E-76
score: 256.7 |
| IPR000719 | Protein kinase domain | PROSITE | PS50011 | PROTEIN_KINASE_DOM | coord: 69..339
score: 50.223 |
| IPR020636 | Calcium/calmodulin-dependent/calcium-dependent protein kinase | PANTHER | PTHR24347 | SERINE/THREONINE-PROTEIN KINASE | coord: 61..407 |
| IPR017441 | Protein kinase, ATP binding site | PROSITE | PS00107 | PROTEIN_KINASE_ATP | coord: 75..98 |
| IPR008271 | Serine/threonine-protein kinase, active site | PROSITE | PS00108 | PROTEIN_KINASE_ST | coord: 195..207 |
| IPR011009 | Protein kinase-like domain | SUPERFAMILY | 56112 | Protein kinase-like (PK-like) | coord: 62..365 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000000389 ID=EMLSAP00000000389|Name=EMLSAP00000000389|organism=Lepeophtheirus salmonis|type=polypeptide|length=604bp
MPGICPRCSKNVYFAEEKQAVGKSWHKLCFVCENDLNFYNFIEDGNEVPP
EEQRNGSAMPDEDDFYEYYDTMEVLGKGLSSVVRRCVEKSSGKQYAVKIM
DVSDDKNLVDAEGRSIEEQVQLEINVLKVVSNHEYIVTLHQVFCSSPHYF
LIFELCTKGELFDFLNNSVILSEKKCKIIFKQILEAVAHCHKLGIVHRDL
KPENILLDDNNIVKLTDFGFARKIKHTDRLFETCGTPGYLAPEVLMAGMV
DXNKCTGYNIEVDAWACGVIMYTMCVGKPPFYHRKQLLMIRSIMEGKYSK
NCXEWDNITNETKDLIERLLTVNPKDRLTIEEALQHESFVSNKVLLFNAK
KSFRIAILCVRFLVRFKRICSTPEQVPVSTMREEPYAIKLIRKDIDDKSF
HVYNHWILNTNKGLLYQLLPKKQSKCKKLLDSGSITEHDGDMFCNSCYRK
NFGPKGYGFGGGAGTLSMDDGKGYSTNMNKVDHQAEAYIAPRRVMTEANG
NSVNKTSDAKPFKKPVPKWGGAEICPRCNRSVFIAELMRGAGKAWHKSCF
TCNICNKRVDSSNLCERDGDIFCKACYGKNFGPKGFGFGLSAGSXKIETA
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