EMLSAP00000000733, EMLSAP00000000733 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000733
Unique NameEMLSAP00000000733
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length678
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 47..63
score: 59.38
coord: 96..104
score: 64.76
coord: 63..78
score: 58.29
coord: 104..112
score: 62.02
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399ZnF_C4coord: 44..115
e-value: 6.9E-37
score: 138.5
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 46..114
e-value: 2.5E-31
score: 107.6
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 47..73
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 44..119
score: 18.356
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 600..675
e-value: 3.7E-4
score: 19.3
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 508..599
e-value: 1.6E-37
score: 128.9
coord: 279..280
e-value: 1.6E-37
score: 128.9
coord: 103..131
e-value: 1.6E-37
score: 128.9
IPR008946Nuclear hormone receptor, ligand-bindingSUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 468..675
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 45..102
e-value: 1.4E-28
score: 98.4
IPR000536Nuclear hormone receptor, ligand-binding, corePFAMPF00104Hormone_recepcoord: 518..584
e-value: 3.7E-8
score: 32.6
NoneNo IPR availablePANTHERPTHR24082NUCLEAR HORMONE RECEPTORcoord: 13..675
NoneNo IPR availablePANTHERPTHR24082:SF4NUCLEAR HORMONE RECEPTORcoord: 13..675
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 44..115

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000733 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000733EMLSAT00000000733-696580Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000733 ID=EMLSAP00000000733|Name=EMLSAP00000000733|organism=Lepeophtheirus salmonis|type=polypeptide|length=678bp
MKIKNRECDSLLEISNSLYNTRSGNSACGGSDSNNSVHNAQIEIIPCKVC
GDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQ
FCRLQKCLALGMSRDGGGALXPSGRSSHNGNSPDSSCFDTQQQPSSTDMS
YEGGGATSGFSYGSDLSPYNGGYTFTNIPPPPHPPPPPPQQQHPQPGSEW
TDYGNVXSTTSPFXSRSTPLDIPNPNNTNSSNSNNNNNNNNSSNSGGIHG
APGPPESRIPSTSTASTSSSSSSSSSSSTSTSTTTTSSSGSASRHNNNNT
STAAIPKAESPSTLVAVPGMKHPSQTSYGSSNRIGMTIKQEVTDMISGQT
HLEGREEEDPLSMGYDVDSTSNFATHQPSKSHHHLQPPPHPPSLHPSHHQ
PNHPSHHHPHPAXQQXQPPVHTQXXQPQAQQHPGHHHHPSGSFSSGMHNN
HELYLLQEELQNDRIGVLLTNSIFEAHTRTSLLTRSQIHEQCKQGVDQVK
LYTFKNMSQEELWLCAAQKLTNVIQQIIEFAKMVPGFMKFPQDDQITLLK
GGAFELAVIRMSRYFDLSQNAVLFFDIMLPMESFMTTGDTGEMNLVNQIF
DLAKAVFQTLQRELTNRPPMVPTKGDVSVLTKLLNKRHTLREINFLHTEA
LTRFRSGNGSMIEFPALYRELFSSDHPS
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