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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR019594 | Glutamate receptor, L-glutamate/glycine-binding | SMART | SM00918 | Lig_chan-Glu_bd | coord: 388..448 e-value: 9.2E-22 score: 88.3 |
IPR001320 | Ionotropic glutamate receptor | SMART | SM00079 | PBPe | coord: 385..783 e-value: 3.3E-86 score: 302.4 |
IPR001320 | Ionotropic glutamate receptor | PFAM | PF00060 | Lig_chan | coord: 503..817 e-value: 1.0E-48 score: 164.7 |
None | No IPR available | GENE3D | 3.40.50.2300 | | coord: 107..244 e-value: 3.9E-38 score: 129.9 |
None | No IPR available | GENE3D | 1.10.287.70 | | coord: 573..691 e-value: 3.8E-56 score: 188.7 coord: 501..535 e-value: 3.8E-56 score: 188.7 |
None | No IPR available | GENE3D | 3.40.50.2300 | | coord: 245..339 e-value: 2.6E-52 score: 176.9 coord: 6..103 e-value: 2.6E-52 score: 176.9 |
None | No IPR available | GENE3D | 3.40.190.10 | | coord: 340..500 e-value: 7.0E-45 score: 152.1 |
None | No IPR available | PANTHER | PTHR18966 | IONOTROPIC GLUTAMATE RECEPTOR | coord: 40..834 |
None | No IPR available | PANTHER | PTHR18966:SF139 | SUBFAMILY NOT NAMED | coord: 40..834 |
None | No IPR available | SUPERFAMILY | 53850 | Periplasmic binding protein-like II | coord: 394..486 coord: 645..783 |
None | No IPR available | TMHMM | TMhelix | | coord: 808..830 |
None | No IPR available | TMHMM | TMhelix | | coord: 620..642 |
None | No IPR available | TMHMM | TMhelix | | coord: 501..523 |
IPR001828 | Extracellular ligand-binding receptor | PFAM | PF01094 | ANF_receptor | coord: 9..346 e-value: 2.0E-57 score: 194.4 |
IPR001638 | Extracellular solute-binding protein, family 3 | PFAM | PF00497 | SBP_bac_3 | coord: 397..781 e-value: 4.7E-22 score: 78.2 |
IPR028082 | Periplasmic binding protein-like I | SUPERFAMILY | 53822 | Periplasmic binding protein-like I | coord: 7..359 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000000824 ID=EMLSAP00000000824|Name=EMLSAP00000000824|organism=Lepeophtheirus salmonis|type=polypeptide|length=949bp MADTIHEIAFRYAVDRINNDRDILPRTQLTAQIERIPPQDSFYASKRVCK ALSDGLGGIFGPQSGVTSTHVQSICDSLEVPHVETRYDYRLTRDDYSINL YPHPHALGQAFVDLVSAMKWKKFTVLYEKSEGLVRLQEXLKLSSNDKDMK ITIRQLTPGLGGDYRPLLKSMKTSGETQIILDCLITTVPDVLKQAQQVGI MTAYHSYLITSLDLHTIELEDFKYGGTNITAFRLVDPTSDVVKSVVQDWV LGELRYGRKIPFHEKSIRTETALVYDAVQLFARALTDLDRSQNIQITPLD CVDGEPWQHGTSLLNYMKLVEAEGLTGKIQFDSEGFRSNFDLEIIELKKD GLNKVGVWNKETGANFTRNFTEAYSEIVESLHNKTLIITTILALTGNARF EGYNVDLIDEISKILGFNYSFHMVEDGTYGXYDEKTKTWXGMIGELLSQK ADLAVADLTITYEREQGVDFTMPFMNLGVTILFKKPKAKDPYLFSFLSPL ALXVWIYMMXAYLAVSLLLFILARISPYETSGVVNDVYWRNDEKGSRLAR PDPIYETLFSGCGRPVRTIGTQVEDRREQEKNSGDTFTLLNSFWFMIASL LQQGTDLLPRAVSTRMVAGMWWFFTLIMISSYTANLAAFLTVERMDSPIE SAEDLAKQNTISYGSLRAGSTAAFFRDSKIPTYSRMWVFMDSDDKNFVKS NSAGVERVIKENGKYAFLMESTTVEYIVERKCDLTQIGGLLDSKGYGIAL PPNSPFRTPISSAILQLQEGGKLHMLKEKWWKQRKGGGKCQEVPEKEAAA LNLSNVGGVFVVLLGGLGVACIIAVAEYLWNKRQMQKFKPATPPPGHLST CTTNSXLNXLTRPANSYENGQVTHLDLAAHAPVSHCPGENGVLSPMNDNG GFLTTSLSVAALNQTSCAVPHHSMQGWALPPSGGNGCGNPGPEMEYEHT back to top
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