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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR017998 | Chaperone tailless complex polypeptide 1 (TCP-1) | PRINTS | PR00304 | TCOMPLEXTCP1 | coord: 54..72 score: 33.58 coord: 343..365 score: 27.48 coord: 377..389 score: 37.16 coord: 32..48 score: 33.73 |
IPR012722 | T-complex protein 1, zeta subunit | TIGRFAM | TIGR02347 | TIGR02347 | coord: 87..501 e-value: 1.5E-187 score: 622.1 |
IPR012722 | T-complex protein 1, zeta subunit | PANTHER | PTHR11353:SF21 | CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, ZETA SUBUNIT, TCPZ | coord: 1..501 |
IPR027409 | GroEL-like apical domain | GENE3D | 3.50.7.10 | | coord: 175..343 e-value: 5.7E-51 score: 172.5 |
IPR027409 | GroEL-like apical domain | SUPERFAMILY | 52029 | GroEL apical domain-like | coord: 173..347 |
IPR002423 | Chaperonin Cpn60/TCP-1 | PFAM | PF00118 | Cpn60_TCP1 | coord: 31..90 e-value: 3.6E-15 score: 55.4 coord: 87..495 e-value: 5.4E-106 score: 354.9 |
IPR002423 | Chaperonin Cpn60/TCP-1 | PANTHER | PTHR11353 | CHAPERONIN | coord: 1..501 |
IPR002423 | Chaperonin Cpn60/TCP-1 | SUPERFAMILY | 48592 | GroEL equatorial domain-like | coord: 375..494 coord: 12..107 |
IPR027413 | GroEL-like equatorial domain | GENE3D | 1.10.560.10 | | coord: 14..91 e-value: 7.6E-17 score: 60.8 coord: 362..494 e-value: 3.5E-27 score: 94.6 |
IPR027410 | TCP-1-like chaperonin intermediate domain | GENE3D | 3.30.260.10 | | coord: 114..174 e-value: 1.4E-19 score: 69.4 coord: 344..361 e-value: 1.4E-19 score: 69.4 |
None | No IPR available | SUPERFAMILY | 54849 | GroEL-intermediate domain like | coord: 338..375 coord: 114..177 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000000909 ID=EMLSAP00000000909|Name=EMLSAP00000000909|organism=Lepeophtheirus salmonis|type=polypeptide|length=502bp MSAISLLNPKAEVARAREALSVNISAAKGIQSVLQTNLGPRGTLKLLVSG AGDIKITKDGNVLLHEMQIQXPTASLIARASTAQDXEGFDESKKTALAVL EDIKIPLGSDPESRKQILTSVASTSLHTKVHTKIAKKLTDICVNAVEAIR QEGTALDLHMVELMEMQHRSEADTSLIRGLVLDHGGRHPEMPKKLTNCYI LTCNVSLEYEKTEVNSGFFYKSAEEREKLVTAERKFIEDRIQKIIEFKKK VCDGTDKSFVLINQKGIDPLSLDALAREGILGLRRAKRRNMERLALACGG QALNTLDGMDESVLGYAGVVYEHVIGENKFTYVEECKNPLSVTILMKAAN KHTLTQIKDAVRDGLRAVKNAIEDGCVVPGAGAFEVAVHMSLKDTINKLK GRARLGVQAYADGMLVIPKTLTLNGGYDAQEIMVKLVQEASDSGNHAVGV DCSTGEVIVPADHGIYDNYNVKKQMIHSCSVIASNLLLVDEIMRAGLSSL KG back to top
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