EMLSAP00000000944, EMLSAP00000000944 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000000944
Unique NameEMLSAP00000000944
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1464
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000072PDGF/VEGF domainSMARTSM00141PDGFcoord: 86..168
e-value: 6.8E-4
score: 18.8
IPR000072PDGF/VEGF domainPFAMPF00341PDGFcoord: 88..166
e-value: 1.7E-14
score: 53.5
IPR000072PDGF/VEGF domainPROSITEPS50278PDGF_2coord: 75..171
score: 15.901
IPR018849Nucleolar 27S pre-rRNA processing, Urb2/Npa2, C-terminalPFAMPF10441Urb2coord: 1301..1461
e-value: 2.0E-14
score: 53.6
NoneNo IPR availableGENE3D2.10.90.10coord: 81..175
e-value: 2.7E-19
score: 68.6
NoneNo IPR availablePANTHERPTHR11633:SF1PDGF/VEGF GROWTH FACTOR RELATED PROTEIN 1coord: 83..244
NoneNo IPR availablePANTHERPTHR11633PLATELET-DERIVED GROWTH FACTORcoord: 83..244
NoneNo IPR availableSUPERFAMILY57501Cystine-knot cytokinescoord: 81..171

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000000944 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000000944EMLSAT00000000944-696791Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000000944 ID=EMLSAP00000000944|Name=EMLSAP00000000944|organism=Lepeophtheirus salmonis|type=polypeptide|length=1464bp
MTSLTDEDDSITTLSLKGALFLNRMRGLPLNVLFRAIRGDLKLSHQEPRN
ELVRSGVQVVSTEGDKSQNWHSMLSSKKKPQIAKPAFCETELTTIELDIE
KKDPNSFYYPTCVRVERCNGCCSHNLLSCQAKESGTIDITIMRANQRTNS
VEYLKIPVIQHKTCSCDCIVKEEDCLSNQVYKRSDCRCACKATDTEKLEC
ISQGNRIWNPHKCFCQCLVVFECTTGQSFDMKSCNCKHQIVNIRFEFYYH
VECKSGVNTHSLSLIMIETSVANGIKFRLKGSALTFDEKLKLCRRVLVTE
PLKVHHGLVLHWIFRTLERKKNLLHDEQGDRRKSLWCLLEVVTDLEEHLS
KMGGISAEMLINIVIPTEDKEVNEKMWILLSTCIESEYLFLNLSKNTHVF
TKVISLLIDQFASKIPCKKSLEALLLRLPENDNSNKGDIDGMIISLSQGL
DLSNHLRKFLTQNFYPQKFLEDWTEFLNLLFEVQDKKPPITICEKMSILK
DPRLQLGIFLPRLFRSLNDKMSTVDACRTFVFFSYILGFSPLNLIQKNSL
WLVSSKQLMEGKRASNKAKFTFLIGMVEGLQEKEDKGWKVEIFGDTTFLK
WVQYLVKDLILQLDNYVEVISKLLKMNPVIXEPLVGTYSCSLLFNELKDF
SAEFSLLVDIYSKLRLIPKLMAKILIYLAQHPEVGADFDKKAISSATWNK
LGTEFQGLVFGQCLELWKTFNYHLDDNKPNSIAFLDIVMDLFLSNCRLVD
FSVPENVFPKVFELIKKTSLYIDKLPRSKGSLIDLSLLLKNVRGVEYLSI
LSDPPNNVLQKIKWYESHQQNISLTFQDVKDLPFEHFSFITPHLDGNEMR
KLAEHYVVNPHPDQNIDEDQKLQSSIIDFLETQISTVLSLNRNRSTDVIE
ELNSLLQGKNSFPKCKAESKAIEELLISYLQFPLEYLEERLSEQVLSFCI
CLLLRTKEVHSSDLFHIISRCMFTMKHLKKFKTLDVGLILVKLAPIPCEG
KWKKTAIQYIIKYSLRSLKNLSDLELHIDEFTKMFNLESNELEISALLLS
ELSKKLLSSSEASNTTYVLSKKLFDSMAKCNFDRISKLNNEEQESIYLLL
TGTSGTLKVLHGNKKSLSLWTNHVXKLFYFCIDDSNVTQNTTIDFLTCLC
NEYIIFKKAIDVPSIWNKLKKKIQFSLHEKTLLESLFQIPDKDVVHELLS
DILSMSMKNENIEEFCGXIGLWQILVQLKKIPSEIQSTREEYIKRMLNFY
HDLVISDKLSYQAIMKVLELEIALFYNDKPVVHEDVEASCLITPLRVNFR
TYTENEHFFDLWNAVYELMYLVLQRRSTLIITRIPIVLDIVRNMVESLMK
SSDQSIKELEEPVLEKLSLCTRRLERLLESFGRNRDDFSRVTPYLVADIL
SGFQNFKIHTEIRSNIVNGLHWLFKLGDKHSLAFLASSLPLGLTEMFKQL
HDDYIKNYKFSGKI
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