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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR008211 | Laminin, N-terminal | SMART | SM00136 | LamNT | coord: 72..308 e-value: 1.0E-82 score: 290.8 |
IPR008211 | Laminin, N-terminal | PFAM | PF00055 | Laminin_N | coord: 78..266 e-value: 3.7E-41 score: 140.5 |
IPR008211 | Laminin, N-terminal | PROSITE | PS51117 | LAMININ_NTER | coord: 74..309 score: 42.209 |
IPR002049 | EGF-like, laminin | SMART | SM00180 | EGF_Lam | coord: 366..426 e-value: 3.0E-7 score: 40.1 coord: 429..476 e-value: 1.5E-11 score: 54.4 coord: 310..363 e-value: 7.5E-6 score: 35.4 |
IPR002049 | EGF-like, laminin | PFAM | PF00053 | Laminin_EGF | coord: 310..358 e-value: 8.1E-7 score: 28.7 coord: 366..426 e-value: 2.1E-8 score: 33.8 coord: 429..469 e-value: 5.2E-10 score: 38.9 |
IPR002049 | EGF-like, laminin | PROSITE | PS01248 | EGF_LAM_1 | coord: 393..429 |
IPR002049 | EGF-like, laminin | PROSITE | PS01248 | EGF_LAM_1 | coord: 329..363 |
IPR002049 | EGF-like, laminin | PROSITE | PS50027 | EGF_LAM_2 | coord: 429..478 score: 19.852 |
IPR002049 | EGF-like, laminin | PROSITE | PS50027 | EGF_LAM_2 | coord: 310..365 score: 9.95 |
IPR002049 | EGF-like, laminin | PROSITE | PS50027 | EGF_LAM_2 | coord: 366..428 score: 9.322 |
IPR018933 | Netrin module, non-TIMP type | SMART | SM00643 | C345C | coord: 518..638 e-value: 7.2E-16 score: 68.7 |
IPR018933 | Netrin module, non-TIMP type | PFAM | PF01759 | NTR | coord: 520..637 e-value: 2.8E-20 score: 71.8 |
None | No IPR available | GENE3D | 2.10.25.10 | | coord: 428..469 e-value: 5.9E-12 score: 44.8 |
None | No IPR available | GENE3D | 2.10.25.10 | | coord: 365..422 e-value: 4.8E-15 score: 54.7 coord: 308..357 e-value: 5.3E-16 score: 57.8 |
None | No IPR available | GENE3D | 2.40.50.120 | | coord: 506..641 e-value: 2.9E-18 score: 65.2 |
None | No IPR available | PANTHER | PTHR10574 | FAMILY NOT NAMED | coord: 58..641 |
None | No IPR available | PANTHER | PTHR10574:SF219 | NETRIN-1 | coord: 58..641 |
None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..23 score: 0.834 |
None | No IPR available | SUPERFAMILY | 57196 | EGF/Laminin | coord: 366..431 |
None | No IPR available | SUPERFAMILY | 57196 | EGF/Laminin | coord: 429..469 |
None | No IPR available | SUPERFAMILY | 57196 | EGF/Laminin | coord: 310..368 |
IPR001134 | Netrin domain | PROSITE | PS50189 | NTR | coord: 506..643 score: 19.236 |
IPR008993 | Tissue inhibitor of metalloproteinases-like, OB-fold | SUPERFAMILY | 50242 | TIMP-like | coord: 504..643 |
IPR008979 | Galactose-binding domain-like | SUPERFAMILY | 49785 | Galactose-binding domain-like | coord: 112..194 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000001158 ID=EMLSAP00000001158|Name=EMLSAP00000001158|organism=Lepeophtheirus salmonis|type=polypeptide|length=645bp MTLFVHLVINLLLLSVCVRSSLGRRFGDSKLLLPYSKKSSSSSSSSLLLL DESGSFSSSSSSKRDPCYDDKKKRPVSCIPDFVNAAFGLPVDASSTCGGS PTEICDSDKCHTCDSSHKENSHPPEFLTDLHNPSNVTCWKSDLLDDSTNA SLTVSLKKKFELTYISLHFCGPKPTSMIIFKSMDHRKSWQPFQYYAEDCR TTFKKNSKVPITRANEQEALCVSSYMKTDSTRIAFSTLADRPSSEDFEHS PVLQDWVTATDIKIVFPPNPLVSGDVAIEESLIPSSTQVNQTSLPSRWVG VSDLAVGGRCKCNGHASSCSIEKDGEMTCNCQHNTAGRECEKCKSFHFDR PWGRATSHSANECVACKCNQHARRCRFNMELYQLSGGXSGGVCLKCRHNT AGRHCHYCKEGYYRNSKRDISHKKACEPCNCHPVGASGKICNQTNGQCPC KDGVTGVECNRCKEGYQQSGSPIAPCIKVPXSHHNRLTSSKSGSSAYENP ARDDECATCTSTSKRVQMRRYCKMDSVYLITVSDRDRADSKWSRFSILVE KRYKKSKKRNRNNHFRRGEETYLWVKTKHLRCRCPKIRPNTSYLILNEDP DEDAGDKKGKRGLIISKNTLVIEWKREWRRRMKRFKKRSRKYCNQ back to top
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