EMLSAP00000001209, EMLSAP00000001209 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001209
Unique NameEMLSAP00000001209
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length948
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 722..743
NoneNo IPR availablePFAMPF12874zf-metcoord: 454..475
e-value: 0.0037
score: 17.2
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 350..371
e-value: 0.094
score: 12.9
coord: 277..298
e-value: 0.0069
score: 16.5
coord: 242..265
e-value: 1.1
score: 9.6
coord: 121..140
e-value: 0.16
score: 12.2
coord: 212..235
e-value: 0.26
score: 11.6
NoneNo IPR availablePFAMPF13465zf-H2C2_2coord: 893..917
e-value: 2.5E-7
score: 30.5
NoneNo IPR availablePANTHERPTHR24375FAMILY NOT NAMEDcoord: 2..930
NoneNo IPR availablePANTHERPTHR24375:SF0SUBFAMILY NOT NAMEDcoord: 2..930
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 6..56
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 241..294
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 120..171
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 891..930
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 176..231
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 345..394
IPR015880Zinc finger, C2H2-likeSMARTSM00355ZnF_C2H2coord: 6..28
e-value: 0.24
score: 20.5
coord: 421..444
e-value: 0.95
score: 18.5
coord: 34..56
e-value: 1.6
score: 17.7
coord: 851..873
e-value: 9.2
score: 13.6
coord: 175..197
e-value: 0.054
score: 22.6
coord: 212..235
e-value: 0.11
score: 21.7
coord: 149..171
e-value: 0.052
score: 22.7
coord: 275..298
e-value: 0.54
score: 19.3
coord: 348..371
e-value: 1.3
score: 18.0
coord: 376..399
e-value: 7.7
score: 14.3
coord: 878..901
e-value: 60.0
score: 6.4
coord: 907..929
e-value: 0.0033
score: 26.6
coord: 242..265
e-value: 0.026
score: 23.7
coord: 121..143
e-value: 0.016
score: 24.4
coord: 453..476
e-value: 0.11
score: 21.6
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 272..299
e-value: 3.3E-7
score: 29.5
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 135..173
e-value: 1.6E-4
score: 20.7
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 889..907
e-value: 3.9E-6
score: 26.3
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 908..929
e-value: 9.0E-9
score: 34.5
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 455..476
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 151..171
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 244..265
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 277..298
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 853..873
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 378..399
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 421..444
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 350..371
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 8..28
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 214..235
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 909..929
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 123..143
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 177..197
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 376..404
score: 9.369
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 348..376
score: 9.66
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 907..934
score: 10.575
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 6..33
score: 10.97
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 275..303
score: 10.305
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 149..176
score: 10.45
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 175..197
score: 9.993
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 212..240
score: 9.806
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 121..143
score: 10.408

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001209 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001209EMLSAT00000001209-697056Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001209 ID=EMLSAP00000001209|Name=EMLSAP00000001209|organism=Lepeophtheirus salmonis|type=polypeptide|length=948bp
MSEFNFACTKCPRTFKLSEFYEKHKKVHELKKQHVCNICGFVXGAAKGLE
GHLKXHQESELHAAESKIETPSISSTPPPSTQSSSSQSSSPAQGHGTGNY
RVYENIPDVNDGAYQNGIGYFVCELCSREFSGLNSLKKHMPIHGRSVQHK
CDTCGFVYGKKEYLTEHARLHNGFTTCEICGQGFTKVSLLKEHLKCHRNI
TMDGSKNESVPFKCHICQDVYPEASQLKIHLDSAHTPTKSIFQCDTCPAS
FVNAKDKNKHMINEHRFGSFFEKLFWCPLCNQGFTRHYNLKMHLYKTHGK
ETIDNNFSSEELTEILSPRPSNGKDSVNRSVVSKATHYFDETKGTQMLSC
NLCSDSFLRKNDLWIHLESAHAAVLPVCRVCEDKFLDLAELKEHIELAHG
KRKPGPASKTNAHPLSRSGSCQCLECGIILPERLSLSTHMKIVHSTMETD
IGSHCELCQKDFPSLLDLEAHQKGKHPNLNKRLQNLRDALFPEPKKMKLE
TDDEGNSALSVLSMSSVSSLVNDARCDVSPSKLRNAHKAETDLIAMNSLQ
QRPNSSSQEYNQDQLINERDETDFQDDFEEDVQYVPIMEDFYFEDMIIHP
CYVVIPFVSDEEIEAACSKSQQCPPIDDFDEDQGQLTIDEGSYDENALES
SKNPDTPFTGEQENFNSSPKGYDADDIKGDTPHMGFYPDNISDFSLPFTL
SGLWKKKADILGPNAMKQADLLEKQIKKINDYEKRQAEKRVKSESDDGEM
SPSEDAPVLTRSHTPDQIPQNNNNYVPHGKRKSPSSPPDLKYQQAKINLT
TSLNDEDIKFDSSPYPSSPGKGHRIKTSPHKAPDANVSKYESQIQHNHWP
VECIKCDLQLNDLQFFNIHMNDHWTGDKCCPVCKLLINSKRFNFKQHLKI
HTGEKPFVCDICKRSFRQKAHMVKHVTTHRSLPAAQIKVELPAGLSVN
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