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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 791..812 |
None | No IPR available | PFAM | PF13895 | Ig_2 | coord: 117..191 e-value: 0.088 score: 12.8 |
None | No IPR available | PANTHER | PTHR10489 | CELL ADHESION MOLECULE | coord: 24..1315 |
None | No IPR available | PANTHER | PTHR10489:SF480 | DOWN SYNDROME CELL ADHESION MOLECULE-LIKE PROTEIN DSCAM2 | coord: 24..1315 |
None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 305..401 |
None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 114..199 |
None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 1090..1184 |
None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 214..306 |
None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 22..108 |
None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 397..495 |
None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 592..717 |
None | No IPR available | SUPERFAMILY | 48726 | Immunoglobulin | coord: 484..593 |
IPR003598 | Immunoglobulin subtype 2 | SMART | SM00408 | IGc2 | coord: 220..292 e-value: 2.3E-5 score: 33.8 coord: 505..580 e-value: 3.4E-5 score: 33.3 coord: 410..479 e-value: 1.7E-10 score: 50.9 coord: 26..96 e-value: 8.7E-10 score: 48.5 coord: 127..193 e-value: 1.1 score: 6.7 coord: 318..383 e-value: 5.1E-11 score: 52.6 coord: 606..699 e-value: 1.1E-9 score: 48.2 coord: 1102..1166 e-value: 0.26 score: 12.7 |
IPR003599 | Immunoglobulin subtype | SMART | SM00409 | IG | coord: 600..711 e-value: 3.8E-5 score: 33.1 coord: 499..591 e-value: 0.0016 score: 27.7 coord: 214..303 e-value: 0.077 score: 22.1 coord: 121..206 e-value: 3.1E-5 score: 33.4 coord: 312..397 e-value: 0.013 score: 24.7 coord: 20..107 e-value: 3.8E-10 score: 49.7 coord: 404..492 e-value: 1.8E-7 score: 40.8 coord: 1096..1177 e-value: 4.4 score: 14.5 |
IPR003961 | Fibronectin, type III | SMART | SM00060 | FN3 | coord: 862..921 e-value: 22.0 score: 8.5 coord: 730..836 e-value: 0.022 score: 23.9 coord: 985..1072 e-value: 2.3E-8 score: 43.8 coord: 1179..1259 e-value: 0.76 score: 18.8 |
IPR003961 | Fibronectin, type III | PFAM | PF00041 | fn3 | coord: 938..981 e-value: 6.1E-6 score: 26.1 coord: 988..1075 e-value: 5.0E-7 score: 29.6 |
IPR003961 | Fibronectin, type III | PROSITE | PS50853 | FN3 | coord: 935..979 score: 10.048 |
IPR003961 | Fibronectin, type III | PROSITE | PS50853 | FN3 | coord: 1180..1269 score: 13.104 |
IPR003961 | Fibronectin, type III | PROSITE | PS50853 | FN3 | coord: 985..1081 score: 15.787 |
IPR003961 | Fibronectin, type III | PROSITE | PS50853 | FN3 | coord: 741..846 score: 9.902 |
IPR003961 | Fibronectin, type III | PROSITE | PS50853 | FN3 | coord: 862..930 score: 7.825 |
IPR003961 | Fibronectin, type III | SUPERFAMILY | 49265 | Fibronectin type III | coord: 1179..1318 |
IPR003961 | Fibronectin, type III | SUPERFAMILY | 49265 | Fibronectin type III | coord: 937..1077 |
IPR003961 | Fibronectin, type III | SUPERFAMILY | 49265 | Fibronectin type III | coord: 807..926 coord: 739..777 |
IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 371..491 e-value: 3.5E-19 score: 68.5 |
IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 880..927 e-value: 9.3E-7 score: 28.1 |
IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 492..588 e-value: 8.4E-14 score: 51.1 |
IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 20..108 e-value: 1.4E-16 score: 60.1 coord: 589..716 e-value: 3.7E-17 score: 61.9 |
IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 1177..1275 e-value: 5.0E-9 score: 35.6 coord: 731..852 e-value: 3.7E-7 score: 29.6 |
IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 214..285 e-value: 8.9E-14 score: 50.7 coord: 327..370 e-value: 8.9E-14 score: 50.7 |
IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 1097..1176 e-value: 1.8E-8 score: 33.6 |
IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 114..202 e-value: 2.0E-7 score: 30.6 |
IPR013783 | Immunoglobulin-like fold | GENE3D | 2.60.40.10 | | coord: 985..1078 e-value: 1.5E-16 score: 59.7 coord: 929..980 e-value: 8.2E-9 score: 34.8 |
IPR013098 | Immunoglobulin I-set | PFAM | PF07679 | I-set | coord: 598..702 e-value: 1.6E-7 score: 30.9 coord: 400..489 e-value: 9.8E-11 score: 41.2 coord: 308..383 e-value: 3.1E-7 score: 30.0 coord: 25..106 e-value: 8.9E-11 score: 41.3 coord: 216..295 e-value: 1.1E-7 score: 31.4 coord: 505..590 e-value: 1.4E-6 score: 27.9 |
IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 398..488 score: 14.691 |
IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 208..301 score: 11.261 |
IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 115..202 score: 10.426 |
IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 594..697 score: 11.007 |
IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 493..589 score: 11.733 |
IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 714..754 score: 7.359 |
IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 1090..1177 score: 9.029 |
IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 306..393 score: 11.642 |
IPR007110 | Immunoglobulin-like domain | PROSITE | PS50835 | IG_LIKE | coord: 5..101 score: 11.987 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000001266 ID=EMLSAP00000001266|Name=EMLSAP00000001266|organism=Lepeophtheirus salmonis|type=polypeptide|length=1486bp MRSKPNILHSKLGASAPSEREVLYMEEGQGAILPCFSSGSPPPFTSWFKE NHHLLDPLPSSPQYHLFGPRGSALKIYRLQSSDSGIYRCVARNDVGESSF SIHLKVYSQGESSPPDLRVLPDIQSADIGSNARFSCQIPDSRISQIEVGL RWLVNGVSPRDPRILVRGDEIEIRNVQQEDGGIYQCFLSLKGNEYQASGE LRLGDSLPRLQYAFIEQTLQPGPMVSLKCSATGSPTPIIKWKLDGFDLPN LERYLIGQYVTVHGDVISHLNISRSLVIDGGLYSCSVINRAGSIIHQGRL NIYGAPMIRPWPEEIKAIEGRTFVLHCPLGGFPIEAVHWEKDNLLLASNL RRKVLNNGTLILSDVAKERDEGSYKCTGSNRQGLSAMGKTKISVIVSPKI VPFAAPASLQQGERISLTCTIARGDAPLTLSWVKNNRPLNNNVGQKIISF DSYNSMLTIEALSLHHIGTYTCLARNKAGSAEYSQHITVHVPPEIEPFTF GDNLREGSRTRVVCGILRGDLPIRLSWLKDGSHLLNGQSSGESDLQIASV DDFSSLLTISNLRYRLHSGVYTCVAENPAGQATFDAPLTVKVPPAWKTKP WSTSSVQGESSKLYCQAEGSPAPKISWKKEIASQPGEFLEIIPPINSGIW IQSNKEKEGGGIDSLPTSDYGITNSTLIIERTSKSHAGRYLCLVSNGIGQ DLHQFFNFTVKVPPRVTFPDRSFALNSALGDKMARLNCEAEGDKPITVTW MRQNEDIDVNSIVRYSLETIATERGVKTILSIHVPWELAKIKTINGRKEI EEERMTKSEEQVRLDGLRPNIYYKVRVFAENSLGRGRSSSELRLEILKNE IVSPKLVSDHSPGLPPNNRLQEGPKSSGGDNYNWTTVERYDRSDLRTILR ELIPNSKYEILIQAQNRYGFGPVSKESGSTGEDLPLTPPRNIICTPMTST SLQLTWAPPEVSDIRGRLLGYRLYYQDVNHKFSIPGQPAKVKTFPLSDRS ILVSWLPPQEPNGIIVSYTLYTRIRTGTPSTHGEPKGGTPIRRTARHFVV NGLKQSFYYQFWITASTKYGEGVRSEIKGERVIANGSSRPFIHSIGSEIV GEVGETISLPCHHMGPPRSVRRQWISNGIKLRKSSKMSFEDECLDIHEIE HSDEGNXSCIIERPLSHDQIVYSLRVKRVPKPPLIELNSASSNSLSLSWT SNQDKIDSPILGAIIHHKRKYGAPYETIIPPFYNFTLSHLNCGTEYTLYS TLFNAIGSSDQSNTLTVSTTGTKPSSSKNGAFIFPSNDSVRLDLYSWDVE NEGCPVRYFVVDYRQSSALSLQDSKSNHHZNSPRKNNSTQXXXAPSSTGS IQPLPPPPSSIDGADKSLMSSRGKDEINPYATFVLPGVAPGEETLRHIVY HENQTLPMSDAYSKSSESNIYTTLNHPPQQNKRSTHRSRRKPTKSSGSIF TAPKKKKKKKPLRELDSDSPVGISSSPTPSSSSSNE back to top
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