EMLSAP00000001757, EMLSAP00000001757 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001757
Unique NameEMLSAP00000001757
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length740
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 538..552
score: 39.24
coord: 454..468
score: 27.34
coord: 496..510
score: 38.26
IPR001680WD40 repeatSMARTSM00320WD40coord: 512..551
e-value: 2.3E-9
score: 47.1
coord: 428..467
e-value: 1.5E-5
score: 34.4
coord: 596..634
e-value: 130.0
score: 3.7
coord: 682..730
e-value: 15.0
score: 9.7
coord: 470..509
e-value: 1.1E-5
score: 34.8
coord: 556..593
e-value: 0.0074
score: 25.5
coord: 637..679
e-value: 75.0
score: 5.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 514..551
e-value: 1.5E-10
score: 40.4
coord: 558..590
e-value: 0.011
score: 15.5
coord: 473..509
e-value: 2.6E-5
score: 23.7
coord: 439..467
e-value: 6.6E-6
score: 25.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 519..551
score: 15.154
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 435..476
score: 10.241
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 477..518
score: 10.341
IPR001660Sterile alpha motif domainSMARTSM00454SAMcoord: 7..75
e-value: 4.1E-10
score: 49.6
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 10..75
score: 13.167
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 410..730
e-value: 4.1E-61
score: 206.0
IPR021129Sterile alpha motif, type 1PFAMPF00536SAM_1coord: 9..72
e-value: 3.8E-11
score: 42.8
IPR025749Sphingomyelin synthase-like domainPFAMPF14360PAP2_Ccoord: 235..308
e-value: 1.3E-23
score: 82.9
IPR013761Sterile alpha motif/pointed domainGENE3D1.10.150.50coord: 7..73
e-value: 2.4E-10
score: 39.3
IPR013761Sterile alpha motif/pointed domainSUPERFAMILY47769SAM/Pointed domaincoord: 7..74
NoneNo IPR availablePANTHERPTHR21290:SF7SPINGOMYELIN SYNTHETASE 1coord: 7..405
NoneNo IPR availablePANTHERPTHR21290SPHINGOMYELIN SYNTHETASEcoord: 7..405
NoneNo IPR availableTMHMMTMhelixcoord: 263..285
NoneNo IPR availableTMHMMTMhelixcoord: 95..117
NoneNo IPR availableTMHMMTMhelixcoord: 175..197
NoneNo IPR availableTMHMMTMhelixcoord: 239..256
NoneNo IPR availableTMHMMTMhelixcoord: 140..162
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 538..552
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 496..510
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 435..688
score: 32.245
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 429..723

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001757 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001757EMLSAT00000001757-697604Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001757 ID=EMLSAP00000001757|Name=EMLSAP00000001757|organism=Lepeophtheirus salmonis|type=polypeptide|length=740bp
MRMEDYPENWSVEQVSEWLECNEFHSLVEPLVEKHRMDGRCLLSLSQSDC
VDIIGIRVLGDVKRLLHAVDLLREPPSHQVDHPESVSIRPERGKALLAFL
YALAVSWMTAFVMVIVHDRVPDTDVYPPLPDILLDNIPHITWAFEMAEIT
GMVLLALWASVLIFHKHRFILARRFFSISGTIFLLRCVTMLITSLSVPGK
HLKCSPRPYGDVWNKYRQAYQIWXGAGLTTQGVRTCGDYMFXGHTVGLTL
LNFFITEYTSTKIYFLHTFTWICNVFGVFFILAAHEHYSIDVFIAFYISS
RLFMYYHTLGNSRSDSQFAKEENRNWFWFPLFSYFEEGVHGQIPNEFEWP
LTLKECVYWIDKLSLKHKAKKLSHSVSNGFANAIMSETKIEAQYTNGHAK
AYQNHTKNLRSTNGVKKKKKVYSTMSIPSFRIQSIDCKQGAVRAVRYNVD
GNYCLTCGSDKSIKLWNPKKGFQLRTYTGHGYEVLDARGSCDNSQIASCG
MDKTVILWDVSIGTALRKWRGHAGTVNCVNFNEDSSCVLSGSIDGTIKIW
DGRSKRNEPIQTLDVFKDSVTSIDVSDHEIIAGSADKTIRRFDIRNGALF
TDYVGYPISSLCFTRDGQCILVNTNGGEPIKLFDKSSGELLQEFLGALNK
KNYRIDATLDHKDKYVISGSENGFAYYWDLVEGNVVAKLDHGEKENAPMV
NSNITVHSLSQHPSSAHLLTATGGKIHIWSDTEEIQADDE
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