EMLSAP00000001950, EMLSAP00000001950 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001950
Unique NameEMLSAP00000001950
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1303
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF12349Sterol-sensingcoord: 620..773
e-value: 6.4E-51
score: 171.7
NoneNo IPR availableGENE3D1.20.1640.10coord: 1141..1252
e-value: 1.3E-13
score: 49.9
coord: 554..761
e-value: 4.4E-22
score: 77.6
NoneNo IPR availablePANTHERPTHR10796PATCHED-RELATEDcoord: 37..1259
NoneNo IPR availablePANTHERPTHR10796:SF35NIEMANN-PICK C1coord: 37..1259
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.847
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 1142..1249
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 556..756
NoneNo IPR availableTMHMMTMhelixcoord: 1194..1216
NoneNo IPR availableTMHMMTMhelixcoord: 1168..1190
NoneNo IPR availableTMHMMTMhelixcoord: 377..399
NoneNo IPR availableTMHMMTMhelixcoord: 592..614
NoneNo IPR availableTMHMMTMhelixcoord: 653..675
NoneNo IPR availableTMHMMTMhelixcoord: 268..290
NoneNo IPR availableTMHMMTMhelixcoord: 804..823
NoneNo IPR availableTMHMMTMhelixcoord: 732..754
NoneNo IPR availableTMHMMTMhelixcoord: 627..649
IPR003392PatchedPFAMPF02460Patchedcoord: 1139..1257
e-value: 5.7E-17
score: 60.8
IPR000731Sterol-sensing domainPROSITEPS50156SSDcoord: 591..756
score: 36.769

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001950 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001950EMLSAT00000001950-697797Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001950 ID=EMLSAP00000001950|Name=EMLSAP00000001950|organism=Lepeophtheirus salmonis|type=polypeptide|length=1303bp
MYGFVLFIVGALLKVACGRXIWFENCSQSPYLENNADKWLNCAYDGEAKE
APLLKLERICPHLDPSEGVCCSEKQLDVMEKNFNISASILGRCPTCLHNF
KKNFCAMTCHPQQSYFLQGQVMTSNHFETQEEVSVISNVTYYVADEFVQR
VYDSCKXVVTPSVSGTALKLMCGKWGDKLCSPYRWFRYLGSLSNGFTPFQ
IDYVFSGETRHHPIPEGIQFYNTVVESCDVGVNGSEPCSCADCESACEPP
HFEETQVGFYIVPGVDGTIFIMAIIFVVGXIIFLAIVIASKILKTQSNLF
MLPDGDDSIYDGTPVTPNGSEESTTSQQTNGSSNHEVDAKGHVQVMQSLN
LIQRAGADLELWLVNFFTFWGTFCAKYPIPVIIVSLSIAIGLCTGIFWLN
VTTDPIELWASPSSRSRVERDFFDKTFRPFYRITQVIVKAKNLSSFKYDD
FLGETKSFGPIFHKEEFLFPLLELQKNIENIKTKENGITLKDICHAPLEP
ISDGGIPVQPYYMLGGFIPENEPFPQNPSYHEASAVVISIMINNYDHNSP
NPEEIKKLEKALEWEKAYYMDIAFTSERSIEDELAKETYGDISTIAVSYI
IMFIYITFSLGENTTWKRFMVESKITLGLGGVIIVLLSVAASIGIFGFID
VPATLIIFEIIPFLVLAVGXDNIFIMVQTCQRDPRGATETHVEHVGRIVG
EVAPSMLLTSVTESTCFFLGAISDMPAVRAFALYAGMALLIDFLMQVTCF
ISLISLDMARQNDNYYDIICCVRGSKKNVRQNGGEGVVYKLFKHFYAPFV
MKEWVRAAVVIIFFGWFCTSLAVTPRIEVGLDQKLSMPDDSFVLKYFTFI
EKYLSVGPPVYFVVDSSNVDLSLPGIQNKFCGGAGCSDESLNSLINLWSK
QPEKTYIAAPAQSWIDDYLAWTIDDSCCKYRAVDMSVCQSNGESKAKAQS
ALSFIDKFFENDDFFGGNSVNDFDDYDHEEEEKEESNSSKNGVLPESMFS
KYDQFYYYEDEDDNQNSVQTKKGRSKRATDSCIKCPNSDDAIDLKRPGPK
AFRRYMKWFLEDNPGERCPKAGHAAYSQSVRLKAHPQKDNESFFQYNVIA
SNFMTFHTILKTPKDYYEALRWARRLSSEIENSINGNLTDKSQGVKVFPY
SIFYVFYEQYLTMWSDTINSLLVSFLSISIVTFILTGFDFLTSIIIVVVI
AMILINLMGMMYFWNISLNAVSLVNLVMAVGISVEFCSHIAKAFTHSMEE
TKILRAKTSHQSTQDGNDATKKTKNRIIAIKSGYFQMNSASTPYSFLVQP
KTI
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