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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR000091 | Huntingtin | PRINTS | PR00375 | HUNTINGTIN | coord: 2394..2413
score: 45.0
coord: 2416..2437
score: 49.09
coord: 991..1010
score: 75.0
coord: 1017..1036
score: 45.0 |
| IPR028426 | Huntingtin family | PANTHER | PTHR10170 | HUNTINGTON DISEASE PROTEIN | coord: 327..2599 |
| IPR016024 | Armadillo-type fold | SUPERFAMILY | 48371 | ARM repeat | coord: 395..625
coord: 4..296 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000001993 ID=EMLSAP00000001993|Name=EMLSAP00000001993|organism=Lepeophtheirus salmonis|type=polypeptide|length=2599bp
MDKVIKAAVRTLSSASTFDTAEESPHPDHGISLESILRSLDKDVSAQSRI
LEEENLNKIIYFHSRHQKSSSKVLEELCKEIKRNSGARSLKICLGALSHI
NIKPQKLGPTISNILPCIIKIVLSENDPENVLSALSEHINPFLKVFGPYA
LLNEVEVFVNTFIHLLFNGDKDQSPSQRRSISICLCAAALHNKAPNYFVT
WTFCRLVSEYIENYHNKDDISFSALLGLFTVSRKFIPLLNEFDDLMNNXF
HDTELEKRLFTLYELCLFHLELYKNSSPNLISTTLELLHQILKTPPQSLK
VKLLSTQGFNEKFLVGXEDNNSNATFENDPSSSKEDPTEENKDKNLSSRK
IYYDEGGLLGSYMDKDIPLIYAARLIVSKTLLTPTKGXPRSDIRISIRSL
AISCMSAIVSLSPKIFLLTLYVDQDEEDFDTTPLLRDIASMDHFVLHEDP
QLSGSTAILLGNVLRGCLLETGGNGIDFWFNQRRPDHQDIIAIFIDLISK
PNISSISIKYALTAICSFIGLMLRSSIARQAGILLFEVVSNNNSLWKNSY
WLVKTSLLDLLSSVDFKQVHFVNGKGFELQNKFFIILKELFVDEDTRVRL
SAADAIVRSIPNLYYPHDWLDECTEYASRNVSSVKVPFDSVIQRVADWLW
QMIATSDNNFQLSGSLEAYFNLKKTYSFGSVSIDTSILDIITHFITSNSN
FTLDINNHTLSLNLLNLIITGDVSKTKNEVLQHCARVLNMIHCLIEESNL
SASVSMSSSCTTNTSYNSSANIQPLKKEDEGGGDLRVGSFNNSQHYSRLF
SSFKNIYGAYVISPASAKNDTSNKFNLLLKSCLKTLDSLLINRCIENMDE
ELAKELLCYLSSTIYLDPLNSLNCVQSMLSYISKKTNEESANELRSSDSQ
EINLPDNASFYKYCFDLPYQEFVSRFQLPKPSLNTSISRKNHLKKFPSSL
FKRALTLRNCNRDALTSYIRLFEPIVIQALQFYIITSKVSEQSQVLSLLI
QLVKLRVNYCLLDSDKVFVGYVIRHLEYIKDGQVHNAEVIIPKIFQFFVL
LSVEKFHSKVVIPIEDIVRLLTQLTSTKNPKWIIPAVYPVIELLFGNFQS
HDNLQQADLEVQREKVFNLLLDYMIYPEILEVFVSILCFVKSEGEDKWRK
VSRILFDNILSLLSTQKINLHDSNSLHILYSFFLCLAPGTLRPVDSLLSS
VLTSSVDLGLVQDVQRWLGFVVVSLCIITNQSPEEGILSRLXEXGITLLS
AQHSLNEDGDSVKPESTFAKFLFQVIGASLSKLHQIVYSLEQWNSYLEEE
VSLLLNFVIYVLKSTRFCRVTKSAQLIAEGKEKENLLYSLEFIDNMALEL
SHAYPFVTLRWAWILSLLKRVQIPFWSKLVSFNSHFLSLDKAILQKGSLI
VLCDYLCETNPMDEYNVELVTWLVSNFSHIIVENISEEPICRFVQSVHNK
ASLSGLFLQAIISRCQHRLTSSVLFQKKTLIALEQVHDSHSFNLLTFLIQ
RFSPRAHLSLSTRIQRLCCKRVDGILNSGSPRELLSAEELSHAIGHLKEM
KLTQRYGRLIALLNELISEWYPDLISPMECDDGRAFTPTSLIGMKPNKVW
FLSQLRNKCSVRDSQFSQNTEQCARMLDCLNSEEDISSVISSADFNISIF
EWLFRDSSTSALLLKTCKTQFFQYHLKKFADKYLTQTPIVYGPRDWNPSV
LESRYKEKMDSNFSCKIFRDILTKSLSIFSLIPPEILNYEDDIVYLKRIP
LILALEFAKWLFFYCTESGVKGKEELHEIVFKALDYVLKNPRISSKITME
EGSLAVHAVFSVLRGDEDIAVSKIPTCSRYKDILKDNSPKNSIVLAALKI
NRLFALYLKEDEEKLWKNKYLKKPISNIILGLARLPHFISYVSVPIEVWK
LGWSDGVPFGPNEMKFPLLSLDHLQEIDILREYTIRVNAIGWXXRLQFEE
TWMSLLGIFSVMQDELSENDIHFLNHCSALVVRTATNLLLKTLCIPNLGL
TNTSGLLRHSRHVSSEFISTSQGKALIALQDKMNKLLKDFRSASALPINS
SINLEDIYDLNRSYGCGQVSSNYILATIKYYEGKAFENNANDQSLPICFL
QREEALANSGLDMDSCLHFLFDLYSSWFKNPGETPLVLLTEAVRSIVALS
DIFTAKNSFQWMYLYFCEILKVHPMEDEIIVSLLRLGICKAISVLEALLS
EDKFKRLLESGYNSPYLPSRFSSLQGVLYILQRKDLLNDNNYHLFSFMVR
NSIEYLENSLPYLTNPCHDYHAALCWSLTFYILENYEEMANDVPWTTNVL
QLALCTPGKTNTSTKIYLIILSGFERLILAGKLTKRYPGSGIXAMDQVVK
LTTDLLTESNPVLVIPSIQLFLSTMYGSGSPAMNAKSDDGHGPSTPERLM
HAMEQMSILFDCIRRSGPKEAHFLCQILPCVLVDFFPAADIINRVITEFI
SPGQPHQTLLAGVMFSVFKEAXQEHSNMLQDWILTILPTFVKRSPISHSA
WCLSCFFLCVPPLLNSSIQEESQDSSSPFIQSDYWLQALFPHLQTRLGSF
SSEDKKLFCLVAKEFYSHLQEETQREKFILAFKEVAHPKTPYHDLLQII back to top
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