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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001806 | Small GTPase superfamily | PRINTS | PR00449 | RASTRNSFRMNG | coord: 11..32 score: 44.8 coord: 51..73 score: 42.57 coord: 149..171 score: 27.52 coord: 112..125 score: 43.89 coord: 34..50 score: 25.23 |
IPR001806 | Small GTPase superfamily | PFAM | PF00071 | Ras | coord: 12..171 e-value: 6.5E-47 score: 158.8 |
IPR003579 | Small GTPase superfamily, Rab type | SMART | SM00175 | RAB | coord: 11..174 e-value: 2.5E-15 score: 66.9 |
IPR020849 | Small GTPase superfamily, Ras type | SMART | SM00173 | RAS | coord: 8..174 e-value: 4.0E-13 score: 59.6 |
IPR003578 | Small GTPase superfamily, Rho type | SMART | SM00174 | RHO | coord: 13..174 e-value: 1.6E-77 score: 273.5 |
IPR003578 | Small GTPase superfamily, Rho type | PROSITE | PS51420 | RHO | coord: 4..171 score: 20.106 |
None | No IPR available | GENE3D | 3.40.50.300 | | coord: 5..182 e-value: 4.4E-51 score: 172.5 |
None | No IPR available | PANTHER | PTHR24072 | RHO FAMILY GTPASE | coord: 8..176 |
IPR005225 | Small GTP-binding protein domain | TIGRFAM | TIGR00231 | TIGR00231 | coord: 8..165 e-value: 2.8E-29 score: 99.8 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 10..171 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000002241 ID=EMLSAP00000002241|Name=EMLSAP00000002241|organism=Lepeophtheirus salmonis|type=polypeptide|length=207bp MGDSDVKTKDIKLVVVGDGAXGKTSLLVSYARNHFPESHDPTVFDCITTS LQRHNIKIKLNLWDTAGQEDYDRLRPLAYHHADVFLLCFALNSNASLYNA KAKWAPELNKHSNAPVLLIGLKADLRKDSNSISKREGSDIARSIKTVKYL ECSSLKREGVTTVFESAVDAVILPKKAGCAGLKVKKDELRNILLLISLHR NVLTGYI back to top
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