EMLSAP00000002595, EMLSAP00000002595 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000002595
Unique NameEMLSAP00000002595
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length630
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001508NMDA receptorPRINTSPR00177NMDARECEPTORcoord: 335..360
score: 34.62
coord: 407..434
score: 46.79
IPR001320Ionotropic glutamate receptorSMARTSM00079PBPecoord: 257..546
e-value: 3.1E-19
score: 79.9
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 332..581
e-value: 3.3E-55
score: 185.7
IPR019594Glutamate receptor, L-glutamate/glycine-bindingPFAMPF10613Lig_chan-Glu_bdcoord: 273..304
e-value: 7.5E-10
score: 38.5
NoneNo IPR availableGENE3D3.40.190.10coord: 464..507
e-value: 1.0E-14
score: 54.0
NoneNo IPR availableGENE3D3.40.50.2300coord: 144..244
e-value: 5.4E-27
score: 94.2
NoneNo IPR availableGENE3D1.10.287.70coord: 328..463
e-value: 1.8E-58
score: 196.2
NoneNo IPR availableGENE3D3.40.50.2300coord: 3..53
e-value: 3.3E-7
score: 29.7
coord: 54..122
e-value: 3.9E-11
score: 42.5
NoneNo IPR availableGENE3D3.40.190.10coord: 510..547
e-value: 4.2E-10
score: 38.6
coord: 273..327
e-value: 4.2E-10
score: 38.6
NoneNo IPR availablePANTHERPTHR18966IONOTROPIC GLUTAMATE RECEPTORcoord: 54..616
NoneNo IPR availablePANTHERPTHR18966:SF38GLUTAMATE RECEPTOR, IONOTROPIC, KAINATE 3coord: 54..616
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 434..546
coord: 272..343
NoneNo IPR availableTMHMMTMhelixcoord: 411..433
NoneNo IPR availableTMHMMTMhelixcoord: 335..354
NoneNo IPR availableTMHMMTMhelixcoord: 572..594
IPR001828Extracellular ligand-binding receptorPFAMPF01094ANF_receptorcoord: 122..251
e-value: 2.5E-17
score: 62.5
coord: 61..113
e-value: 1.8E-5
score: 23.6
IPR028082Periplasmic binding protein-like ISUPERFAMILY53822Periplasmic binding protein-like Icoord: 12..264

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000002595 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000002595EMLSAT00000002595-698442Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000002595 ID=EMLSAP00000002595|Name=EMLSAP00000002595|organism=Lepeophtheirus salmonis|type=polypeptide|length=630bp
MSGLFDITDSKQEVAFRYAVERVNQNRKILPNSILSAQIEKIPPQDSFHA
SKQETRWDYRLKNDAYSVNLYPHPKTISKAYVDLIESFGWMSYTILYEDN
QGLMRLQELLKSPINSDDLHMVNLEEFKYGGTNLTAYRLLDPNRIEIRKV
VEDWIFGEMRYGRVSDVTSMGIKTETALMYDAVHLFAQALQDLDRSRSID
TKSISCNGVETWQHGSSLVNYMKLVEMNGLTGKIIFDQHGLRTDFVLEVI
ELKKDGLVKVGTWNDNTGVNFTQFNYTFKWVDDQKYGKRNKETGEWNGMM
GELLAQVVNINILYKKPTRKPPNLFSFLSPLSLDVWIYMATAYLGVSVLL
FILARFSPYEWDNPHPCADEPDVLVNEFSLVNSMWFTIGSLMQQGSDLAP
KAISTRMVAGMWWFFTLIMISSYTANLAAFLTVERMESPIESAEDLSKQT
KIKYGCVESGSTGNPEGIERVKKENGNYAFLMESTTIEYVIERECDTTQI
GGLLDSKSYGIALPPGSPYRMPISSAILKLQEGGRLHLLKRRWFSEERGG
GVCKKDDDRAQANELSLANVGGVFVVLLAGMGIACLVAVFEFIWKSRKLA
NEENVRNNKAIQKKLSYIFNILLNKANLTK
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