EMLSAP00000003128, EMLSAP00000003128 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003128
Unique NameEMLSAP00000003128
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1260
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 586..614
NoneNo IPR availableGENE3D2.30.30.160coord: 1128..1240
e-value: 1.1E-18
score: 66.7
NoneNo IPR availablePFAMPF13832zf-HC5HC2H_2coord: 315..434
e-value: 8.0E-37
score: 125.4
NoneNo IPR availablePFAMPF13831PHD_2coord: 274..307
e-value: 3.6E-14
score: 51.6
NoneNo IPR availablePANTHERPTHR13793:SF18BROMODOMAIN AND PHD FINGER-CONTAINING PROTEIN 1, BRPF1coord: 1..1260
NoneNo IPR availablePANTHERPTHR13793PHD FINGER PROTEINScoord: 1..1260
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 1127..1237
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 664..680
score: 53.71
coord: 696..715
score: 34.35
IPR001487BromodomainSMARTSM00297BROMOcoord: 624..734
e-value: 3.5E-23
score: 93.0
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 651..717
e-value: 2.5E-15
score: 56.0
IPR001487BromodomainGENE3D1.20.920.10coord: 635..733
e-value: 1.0E-24
score: 86.4
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 647..715
score: 17.025
IPR001487BromodomainSUPERFAMILY47370Bromodomaincoord: 627..739
IPR001965Zinc finger, PHD-typeSMARTSM00249PHDcoord: 262..308
e-value: 1.4E-7
score: 41.2
coord: 372..435
e-value: 4.0E-5
score: 33.0
IPR000313PWWP domainSMARTSM00293PWWPcoord: 1129..1208
e-value: 3.1E-27
score: 106.5
IPR000313PWWP domainPFAMPF00855PWWPcoord: 1130..1237
e-value: 6.7E-16
score: 58.1
IPR000313PWWP domainPROSITEPS50812PWWPcoord: 1131..1210
score: 12.562
IPR015880Zinc finger, C2H2-likeSMARTSM00355ZnF_C2H2coord: 21..46
e-value: 0.0012
score: 28.1
IPR019542Enhancer of polycomb-like, N-terminalPFAMPF10513EPL1coord: 87..239
e-value: 1.7E-23
score: 83.5
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 20..42
e-value: 3.3E-4
score: 19.4
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 258..309
e-value: 1.1E-13
score: 50.2
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 23..46
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 21..46
score: 9.182
IPR018359Bromodomain, conserved sitePROSITEPS00633BROMODOMAIN_1coord: 652..707
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 263..307
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 260..310
score: 9.988
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 255..325

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003128 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003128EMLSAT00000003128-698975Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003128 ID=EMLSAP00000003128|Name=EMLSAP00000003128|organism=Lepeophtheirus salmonis|type=polypeptide|length=1260bp
MGLDFDIRGFIEDMRACKPPYKCPWDDCGKVYKTFSGMSLHLNSSHGKTC
EKVEFVAEGGPFYKSPLKESLSYVESEQMLEFEAEGRLQKISIKEPFGIM
SRKAWEASLPPDALCSERKASPTPDPPKSSKKRRAGGTHEAEDGPKKQHS
SKLPEALWAVIPDYYSMLSPPKSKSTLDPDKYYTFVEKSAELLDKEVEYD
MDEEDVAWLDLINQKRASDSLTKITENQFELLMDRLEKEXYFHVQSNGLL
SEFSQPIDDDAICCVCMDGECSNTNVILFCDLCNLAVHQECYGVPYIPEG
QWLCRRCLQSPSRSVECCLCPNRGGAFKQTDDGRWAHVVCGLWIPEVRFA
NTVFLEPIDSIDNIPPARWKLSCRVCKQRGVGACIQCHKTNCYTAFHVTC
GLLAGLHMKMDTVRESSANGLSVTVRKTAFCDVHTPADSDCKPKLDDIAA
LGISTPKTKARNTPKKSSELSPLPVLFRGLMNFSPQCPWDKAQEIASLIN
VPEKTYFFERLMAYWTLKRQTRNGVPLIRRLQFAKATTKDKSPETPQKNA
HLSRKKKETPPTKETKSKTKSKTKKSSKQKDSFKSLLEHRKLLRQLRQDL
EKVRLLCELIRKREQRKRELIAMDEKRLTIELAPLPVFFGHVTDSLEALD
THSFFDEPVSLDDVPDYLDHIKHPMDFSTIRSKLDHYKSFDCLEKDFALI
YENCLSYNEKGTIFYKAGIKLKDSGSNILKEARKLYNSIGFDCNGLLLSS
SSRSKSRDNASDDVLLKEIDDFLSDKNPLKKGDSAMYMKKLLEYQIKVSS
VTHLGAKNRRLRALKQEITSRKRKSSVDRPNSSLSSKSKKVLNDSVASRK
FDFTFEDEEEEEEEGDQNVVNASRKLRANSREGLADNLSSSTKKRGRKRI
HRTEDDDDEIHENNVAKKSKLADSPRNNKESNDKCNTPAAAKSSPLGVNR
RNAVLFTRKKISASQKEDESGRSSKRKVINDDIKKNSKVSPKPNTEDMEV
DESPPKLDNNLNSKLDQPLSPPSNTLRKRSRRSNNPPPPSLKQPSPPKVV
KPLPKASTVSPNENKNPLSSSSFQHYRRGGTEVVETDEDTQSESATDAVG
SSEDETETDSDSDTSCTESSGGGHQRVPLEPLDLVWAKTRGYPWYPALII
NPKMPRTGYLHNGVPIPVPPQDVLDMASTHSSPHYLILFFDSKRTWQWLQ
REKLEPLGVNSKIDKSKLIQAKKPSEKKAVKKAYEDAILHRCKVTGENAN
FSEESPDEKS
back to top
Add to Basket