EMLSAP00000003308, EMLSAP00000003308 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003308
Unique NameEMLSAP00000003308
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length889
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 816..845
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 400..419
e-value: 1.3
score: 9.4
NoneNo IPR availableGENE3D2.170.270.10coord: 80..190
e-value: 6.3E-17
score: 61.1
NoneNo IPR availablePFAMPF13465zf-H2C2_2coord: 735..759
e-value: 1.0E-8
score: 34.9
coord: 763..788
e-value: 8.6E-9
score: 35.1
NoneNo IPR availablePANTHERPTHR24393:SF0SUBFAMILY NOT NAMEDcoord: 149..858
NoneNo IPR availablePANTHERPTHR24393FAMILY NOT NAMEDcoord: 149..858
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.769
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 294..351
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 718..767
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 336..388
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 256..307
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 89..190
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 757..801
NoneNo IPR availableTMHMMTMhelixcoord: 13..30
IPR015880Zinc finger, C2H2-likeSMARTSM00355ZnF_C2H2coord: 255..278
e-value: 7.6
score: 14.3
coord: 370..392
e-value: 0.18
score: 20.9
coord: 285..307
e-value: 4.4E-4
score: 29.6
coord: 399..419
e-value: 25.0
score: 9.7
coord: 778..800
e-value: 5.0E-5
score: 32.7
coord: 721..743
e-value: 2.6E-5
score: 33.6
coord: 749..772
e-value: 7.4E-4
score: 28.8
coord: 313..336
e-value: 1.6E-4
score: 31.1
coord: 342..364
e-value: 0.0021
score: 27.3
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 316..344
e-value: 4.4E-8
score: 32.6
coord: 721..750
e-value: 5.1E-14
score: 51.5
coord: 345..371
e-value: 1.9E-10
score: 40.1
coord: 751..777
e-value: 1.5E-11
score: 43.7
coord: 285..315
e-value: 2.0E-7
score: 30.5
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 778..801
e-value: 6.0E-9
score: 34.8
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 372..392
e-value: 8.6E-7
score: 28.2
IPR007087Zinc finger, C2H2PFAMPF00096zf-C2H2coord: 342..364
e-value: 6.3E-4
score: 19.8
coord: 370..392
e-value: 0.027
score: 14.6
coord: 285..307
e-value: 0.0027
score: 17.8
coord: 313..336
e-value: 2.0E-7
score: 30.8
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 751..772
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 723..743
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 257..278
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 287..307
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 315..336
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 372..392
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 780..800
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 344..364
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 255..283
score: 9.099
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 749..777
score: 15.5
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 778..800
score: 11.593
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 370..397
score: 11.614
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 721..748
score: 17.101
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 313..341
score: 13.526
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 399..426
score: 9.536
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 342..369
score: 14.44
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 285..312
score: 11.323

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003308 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003308EMLSAT00000003308-699155Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003308 ID=EMLSAP00000003308|Name=EMLSAP00000003308|organism=Lepeophtheirus salmonis|type=polypeptide|length=889bp
MTIGNSSRFRCRRVVSYLFSFFLIVTGVVGQDSSEAKGRSGLSSAVMLTL
GDIKEVSNNGGFFGPQHLLAASAAAAQQLLQPPGSLKLQESSVGRGIGIW
AAERIPLGTRYGPFLGKWALEPGDHRFAWEVIISSAGVRGFLDATHYGSW
LKNLQSVPSHRLDYNVKNVLIGGQIYYETLRDIYPGEELILHPKEPILLD
GERSSLSSPSRGSSHKEEGFNEGSSLRRVPGGGPPNTGEEDILITTEEEQ
ELEGVKCLNCDKNFEDIYILDDHMSDAHGFERDKYICEHCPKKFSWRPNL
LRHKMIHGEYRRFPCENCDKVFTDPSNLQRHIRTNHVGARSHACPECGKT
FATSSGLKQHTHIHSSVKPFRCEVCFKSYTQFSNLCRHKRMHVNCRMQIK
CTKCNLAFSTVTSLSKHRRFCDSKPPNPSFQQSTLCSEDSLLPKGSSSVS
GMSEDSPLTRSPYPHHPPSSSYGSLLGSGTGSTHPPPPFSLFSNPLSFPT
MLQRLAAAHQFQQRLQXQPLNHSHLISSQKMEETEDDLDENRNERASPSP
RAQFAPPSSPPTSTSVPITTTATTTTTPLDLSLWKKTCSEQENNSESDER
PVSPPRGFQQVMEGKPFIPVKDQVLRHPFLEAFYRLHANRVPLFPHPTTL
PPGANSGGYTPYFHNGSRGSTNPNCVLSXGGGISPVSGGDGPSPTTDLLS
GGAGSVAGLLELGGKGSKDRYSCKFCGKVFPRSANLTRHLRTHTGEQPYK
CRYCERSFSISSNLQRHVRNIHNKEKPFKCPLCDRSFGQQTNLERHLKKH
ENCADPSAIVDSPEPRTEDEEDEEEMEEEALDEEDEALEEEEEDGIMEEF
RSFMGKVRDLSSAAXAAAXXSKNNSSTAPSLHQDLLLNN
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