EMLSAP00000003522, EMLSAP00000003522 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003522
Unique NameEMLSAP00000003522
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length795
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000859CUB domainSMARTSM00042CUBcoord: 452..586
e-value: 1.6E-10
score: 51.0
coord: 177..296
e-value: 9.5E-27
score: 104.9
coord: 29..155
e-value: 1.3E-13
score: 61.2
coord: 317..440
e-value: 2.4E-8
score: 43.7
coord: 596..719
e-value: 6.4E-22
score: 88.8
IPR000859CUB domainPFAMPF00431CUBcoord: 458..581
e-value: 3.9E-13
score: 49.3
coord: 317..437
e-value: 5.4E-13
score: 48.8
coord: 39..143
e-value: 1.0E-10
score: 41.5
coord: 596..714
e-value: 7.0E-16
score: 58.1
coord: 185..290
e-value: 9.3E-21
score: 73.8
IPR000859CUB domainGENE3D2.60.120.290coord: 457..583
e-value: 7.3E-17
score: 61.0
coord: 186..294
e-value: 8.0E-27
score: 93.1
coord: 39..155
e-value: 2.2E-14
score: 53.0
coord: 325..439
e-value: 1.2E-17
score: 63.6
IPR000859CUB domainGENE3D2.60.120.290coord: 594..725
e-value: 3.8E-23
score: 81.4
IPR000859CUB domainPROSITEPS01180CUBcoord: 454..586
score: 15.412
IPR000859CUB domainPROSITEPS01180CUBcoord: 29..155
score: 15.384
IPR000859CUB domainPROSITEPS01180CUBcoord: 596..719
score: 20.879
IPR000859CUB domainPROSITEPS01180CUBcoord: 317..440
score: 16.655
IPR000859CUB domainPROSITEPS01180CUBcoord: 177..296
score: 20.017
IPR000859CUB domainSUPERFAMILY49854Spermadhesin, CUB domaincoord: 40..155
IPR000859CUB domainSUPERFAMILY49854Spermadhesin, CUB domaincoord: 459..586
IPR000859CUB domainSUPERFAMILY49854Spermadhesin, CUB domaincoord: 189..293
IPR000859CUB domainSUPERFAMILY49854Spermadhesin, CUB domaincoord: 316..439
IPR000859CUB domainSUPERFAMILY49854Spermadhesin, CUB domaincoord: 595..718
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSMARTSM00192LDLacoord: 724..762
e-value: 6.7E-6
score: 35.6
IPR002172Low-density lipoprotein (LDL) receptor class A repeatGENE3D4.10.400.10coord: 726..762
e-value: 2.9E-6
score: 26.7
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 724..761
score: 8.5
NoneNo IPR availablePANTHERPTHR10127DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAININGcoord: 115..773

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003522 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003522EMLSAT00000003522-699369Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003522 ID=EMLSAP00000003522|Name=EMLSAP00000003522|organism=Lepeophtheirus salmonis|type=polypeptide|length=795bp
MNKTLLNPGQSGRRQDDGCDYSISSSHRCDIKVVSTSSLGSKNGTFRAPN
FLNPEEHVTQCTYTFQAAENERVEIEFDEFDLDGTPPECYHEHLDLFTEA
LHLNVSLIETPFGGRYCGKIPPRTRISLYRYLSFVFLSDRDNVTDARFSG
YYRFIPDDKYNIGTPIPNVISQKGETCSFLIYAKHKKRGEIMTPTYPGTY
PKNTHCTFKFIGEPNQRLRLEFRDFDLFYGGAHCPFDYVTIYDGPDKEAE
KIGTYCGQMRNLVIYSTKNMMYVTFTTLRRTAPVQNRGFYGLFEFSENFV
KLNFIQSDATHIRGTECDQTILSKKESSGTVFSPNYPFPYQTNVVCRYFI
YGMQDEQNLERVILKFEKFNIPMSGKSCNDGYLKVYIRGQEEDHRYNEHD
FEFCGKQDPEAVRTPGPRLVLLFNAGSKPGSGFKALFKFETEYLIPIGTP
SPKDIVNLRTKEGRFNSPRHPSNYPSSTNCTYLFYAEPNEQVQIVFDTFK
VRTDNLQSNTSLGAWKAYGRNQCVEDWLEIFQVYRDKTEELVGRYCASSS
PGPVVSLREVAVGLKVFLLTDDKDVFSGFMGRYLFFKEKSIFGDGCGGNI
TDLDNGVITSPNYPEKYSSSKISGNQQCHWFIHVKPRHKILLYFEEFEVE
GTPNDRGCPAATLRVWPWNQRNKTPLELCGDSLEHNTQILSETNMLRISF
FIADKAVGAKGFKAIWTEIKDGPSCDEFHCFSSSFCISSKLKCNGVKNCG
HNDESDEIDCVIETEVNEYMGFISDLKMERKFHIFNENGNPGTLV
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