EMLSAP00000003611, EMLSAP00000003611 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003611
Unique NameEMLSAP00000003611
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1412
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAAcoord: 1185..1370
e-value: 8.5E-13
score: 58.5
coord: 580..776
e-value: 1.7E-9
score: 47.6
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 1176..1324
e-value: 1.3E-29
score: 103.1
coord: 571..705
e-value: 7.2E-22
score: 78.0
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 1159..1393
score: 18.494
IPR003439ABC transporter-likePROSITEPS50893ABC_TRANSPORTER_2coord: 555..779
score: 23.036
IPR001140ABC transporter, transmembrane domainPFAMPF00664ABC_membranecoord: 839..1110
e-value: 2.3E-35
score: 122.2
coord: 234..500
e-value: 6.3E-39
score: 133.9
NoneNo IPR availableGENE3D1.20.1560.10coord: 872..1135
e-value: 6.8E-67
score: 225.2
coord: 219..526
e-value: 4.1E-28
score: 97.8
NoneNo IPR availableGENE3D3.40.50.300coord: 1158..1392
e-value: 4.6E-67
score: 225.2
NoneNo IPR availableGENE3D3.40.50.300coord: 555..789
e-value: 1.3E-63
score: 214.0
NoneNo IPR availablePANTHERPTHR24223:SF61SUBFAMILY NOT NAMEDcoord: 1..1398
NoneNo IPR availablePANTHERPTHR24223FAMILY NOT NAMEDcoord: 1..1398
NoneNo IPR availableTMHMMTMhelixcoord: 223..245
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 965..987
NoneNo IPR availableTMHMMTMhelixcoord: 370..392
NoneNo IPR availableTMHMMTMhelixcoord: 882..904
NoneNo IPR availableTMHMMTMhelixcoord: 119..141
NoneNo IPR availableTMHMMTMhelixcoord: 502..519
NoneNo IPR availableTMHMMTMhelixcoord: 275..297
NoneNo IPR availableTMHMMTMhelixcoord: 455..477
NoneNo IPR availableTMHMMTMhelixcoord: 28..50
NoneNo IPR availableTMHMMTMhelixcoord: 343..365
NoneNo IPR availableTMHMMTMhelixcoord: 90..109
NoneNo IPR availableTMHMMTMhelixcoord: 831..850
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 1296..1310
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 678..692
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 838..1123
score: 38.224
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 236..514
score: 34.699
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 219..527
IPR011527ABC transporter type 1, transmembrane domainSUPERFAMILY90123ABC transporter transmembrane regioncoord: 840..1135
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1148..1392
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 549..769

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003611 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003611EMLSAT00000003611-699458Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003611 ID=EMLSAP00000003611|Name=EMLSAP00000003611|organism=Lepeophtheirus salmonis|type=polypeptide|length=1412bp
MILFLLSPLELLYNKNKCSSPKTLFDPFSIFKAAIPCILIVLSILEGIFI
QDFDTLSDFLKIFLMITSFGFSLFLHVDGVIRRCSKTSTLQFFFYFLLLI
SSCLSIRRIESHPEDLGRDYLWLICLQTGCVLVATVLYSISETVLKQKSK
KNKENPKKDASFFSLLFYEWITPLLWKGFKKPITEDDLWNLNKDLTCGET
SRRLDQYYFKSGNKKIGIPLMKAFGFEFVIGSTIKFFSDILSMVLPQIMK
LMINHADSEFEMKERSWKGYLYPSMLIIVSFLQSVLLAKYFEIVFLVSMR
IRASLTSLVYRKCLKLSNSSRKNKSVGEIVNIMSVDVSRIADLMPFLTLL
WSSPFQIVVSVIFMYNELGWAIIGGTGILLITIPVNAILSYFGKKFQMKQ
MKAKDNRTKILNEVLGGIRILKLYAWEPSYINKIEGIRGVEIGILKKAAW
LTSFMGFIWSSTPFIVALASFATFVMVDDRNILTAEKAFVTQSYINKMKM
PMAXFPFVIVXAISATVSLKRINQLLTSDELQKDAVERVPMKINQKIDQG
DAIVIRDGNFKWSTEDSENTLSNINLRIKHGSLTAIVGTVGSGKSSLISA
ILGEMVKKSGKVRIKGQIAYVPQESWMQNTSLKNNILFGKPYDEEWYNQV
LEYCCLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYI
FDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTHGISYLPHVHHIA
VMLKGEIIHEGTYQELLEKKIIQTIEEEEEQEKDGVQENNINNYNNIPKT
FDATVNNLEKAAIIQKEGLETGRVSWSVYKYYIQSIGFLGAFLIIFNQML
NQLFGFGSSIWLEAWTQEDYGNATIPKYRDLYLGVYGALGIGQAVTIFLL
SLSVAMFTLKASKVIHNQTYDRIMRAPISFFDSTPQGRILNRFSKDISIC
DNILGSNIRQWLXCLFXFLGIVILIVSVLPLFLLFALPTSLVFILIQNIY
VASSRQLKRLQSVTRSPIYSHFSESLNGLSSIRAYGAQSKFILESINKID
TNQRCNYPSIIANRWLAMRLETIGNLCIFGXAILTMTNPELVGPGKVGLV
ISYALILTQNLNWLXRQTSEIETNIVAVERLKEYAGLDIEKEWRLHKDTS
YNWPSQGKVEFKNYSLRYKANSDLVLKKINFTIFGGERVGIVGRTGAGKS
SLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTL
RSNLDPENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQ
RQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTI
AHRLKTIIDYDKILVLDKGTVIEFGSPNELYMNSDSVFHSMINAAGITLT
ASPKNEIESTSL
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