EMLSAP00000003710, EMLSAP00000003710 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000003710
Unique NameEMLSAP00000003710
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length260
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002172Low-density lipoprotein (LDL) receptor class A repeatGENE3D4.10.400.10coord: 198..236
e-value: 1.1E-5
score: 24.7
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 188..237
score: 9.625
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 200..236
NoneNo IPR availablePANTHERPTHR21105FAMILY NOT NAMEDcoord: 176..258
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.741
IPR023415Low-density lipoprotein (LDL) receptor class A, conserved sitePROSITEPS01209LDLRA_1coord: 212..236

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000003710 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000003710EMLSAT00000003710-699557Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000003710 ID=EMLSAP00000003710|Name=EMLSAP00000003710|organism=Lepeophtheirus salmonis|type=polypeptide|length=260bp
MQLPGYIFLASVLFLSDYVWCGVLSNNNGEGETFSSTPSSKTQTYFPNLX
ADTTTTPKATTATPTVAXSSSVTTSKSYSSTEAVKSGSPPSTISSTRXII
TTGIRPPTHQDSSHPRVERSXLFLDDENNNPXYPYRDNPHPGDDTNKKRG
SNQGFSPESIAVSGRKMARNFMIRTPRSGRRYDVAQIECPRSDDRLERFA
CPTPDFRNRYRCIDDRSLCDGFYDCPGKEDENPEQCLFYKTTKAHLDILA
EALLRWARGR
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