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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR001680 | WD40 repeat | SMART | SM00320 | WD40 | coord: 303..345
e-value: 87.0
score: 4.8
coord: 171..211
e-value: 0.0026
score: 27.0
coord: 214..256
e-value: 4.6
score: 12.8 |
| IPR001680 | WD40 repeat | PFAM | PF00400 | WD40 | coord: 175..206
e-value: 0.0028
score: 17.3 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | GENE3D | 2.130.10.10 | | coord: 60..268
e-value: 6.3E-25
score: 87.0
coord: 301..382
e-value: 6.3E-25
score: 87.0 |
| None | No IPR available | PANTHER | PTHR11227:SF19 | WD REPEAT DOMAIN, PHOSPHOINOSITIDE INTERACTING 2 | coord: 13..362 |
| None | No IPR available | PANTHER | PTHR11227 | WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES (WIPI)-RELATED | coord: 13..362 |
| IPR017986 | WD40-repeat-containing domain | SUPERFAMILY | 50978 | WD40 repeat-like | coord: 17..259
coord: 304..346 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000003760 ID=EMLSAP00000003760|Name=EMLSAP00000003760|organism=Lepeophtheirus salmonis|type=polypeptide|length=452bp
MTGHNESPEVSPELVFTSFNQDVTSLAVGTTSGYKLYSLNSTDTLETVYA
NEVEDALIAERLFSSSLVAVVSRSAPRKLKVCHFKKGNEICNYSYPSKIL
SVKLNRARLVVCLEEALYIHNIRDMKVLHTIRDTPSNLKGLCVLSVSSDN
CYLAYPGHSTIGEMQIFDAANLSGVRTIFAHSGQLAALQFSPSGTTIASA
SDKGTVIRVFSVSEGTKLYELRRGLKRTAVIHSLCFSLCGMFLACSSNTE
TVHIFRLEQETNRETDHLGHSPPYPDSWMGYLSTVVSAGANYLPTQVTDT
LLQGRAFATVHHNHYGLKNVCALAVIKKVLRLLVASQDGYLYMYGLDVNE
GGDCSLIRQFRLTNEQDASIVGEGVASGSDSGTEENAPPQVTITHSEPQQ
SYADRLKNRSSNEMTGELAESEKFHEMEAAVQIPPKQAFFLDDDGEFPPV
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