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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | GENE3D | 3.20.20.140 | | coord: 1373..1677 e-value: 2.3E-80 score: 268.9 |
None | No IPR available | PANTHER | PTHR12809 | MEDIATOR COMPLEX SUBUNIT | coord: 25..1344 |
None | No IPR available | SUPERFAMILY | 51556 | Metallo-dependent hydrolases | coord: 1637..1677 coord: 1378..1609 |
IPR001130 | TatD family | PFAM | PF01026 | TatD_DNase | coord: 1403..1677 e-value: 1.8E-45 score: 155.0 |
IPR013947 | Mediator complex, subunit Med14 | PFAM | PF08638 | Med14 | coord: 28..219 e-value: 3.9E-52 score: 176.2 |
IPR018228 | Deoxyribonuclease, TatD-related, conserved site | PROSITE | PS01091 | TATD_3 | coord: 1587..1603 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000003800 ID=EMLSAP00000003800|Name=EMLSAP00000003800|organism=Lepeophtheirus salmonis|type=polypeptide|length=1680bp MVLSMGGGAGSGGLDVVAPQHQGAGGGQVSLGMLTEFIVQRTYHELSILS ELLPRKEDMERKIEIFNFASRTRMLFIRLLSLVKWASSASKVDKCGSIIN YLERQXRXFXETADSXAKIARDSLPRAXLPNFNLPSAVEILTTGSYSRVP RIIRDKIVAPEPISCMDKKKTLLKLNQVIEHRLVTSNLPLQMRHLHIADG RVTFMVHNEFKASLTLIGEGPSVPWRLLNVQILVEDRDTGEGKALMHSMQ STKLIRERLGNYIRVEEYRLGKXLTVSYWRGWMXKDPAXELGYRFSVQTD PNYPGRPHMVVHSPVLTKEESETAEKAMKSDHLSLERLLVHSIYVRTKSR LRALKTDIEKRLKLNDGHASLHGSPAILSVPILQPCLRSEQLIIAIDTHS GIFLVHVPGYESNPYTSEIQRNLNEDKSKLEPLISQLRIWITKNRVHKTL QQXPATSYETLPILFDQDKHHPLKDLSPNRMYIRLNHHSNAIIIIEFKEK ELNQCEMDYSYYFLWVKPSSIDEDDSNRESSNKIVPSVYFKALSMIELDS FLVTHGPGTKVDIQDFSETILGKRKIPSKSDTPIKRTKYPAYFISDLAHV VAFANERIPFIGIISECDNLNVSHSGIEVEENEIGVFMTIIAFPSVSGVS DDEVSRLRKYLLSTSIRLQSRQGRSWKVEFIFIDNPVTSVQDKNRYPVYF NYDVTIPEQTVVKRILHEWEQMAHLYSVVEDLVDFLDSSESSESANIRIK SYNFKELVLEYGPYFKSTVRIKWKAEESKFSLIFSGIHEFSSTNPHILLR EQLTQHLNEHRDLPWLGKILHETYPPLRSIARLPTTPQMGVTQQRMSIQT FSIIPQGPTHIKLVFYNSYFLDIQIKQGGIVYIRDGAFSVFDQRKVVEGA QPIQGLKTFLMKYIDESVFHRRQSQTEDDNPPSPMSTDDTSNSGLRFNTP HTPPSNPMTPASPHTVGFLQSPPSSIRNPSPASQPVPSPGTSSVRSPLNH PIGSPFHSSSVPSPLAVGSPVTQRPSSKPGYHGSTFTSRALPRLLPQRLW AGANPTPLTLNAFDDICKPSILIPPNGSGNSPFVPTNMSNISPLYRFLGC VYLKRYLLNCIKVEDFLTLLPTNEVGIISFKVEKLNCRVASWPGNSFQSL HLKVQPEDGNQWPPEMLLLLERFFDTKVAAPPYRLIMMSSFISILRCPTE VLRDMIQVMKFDLMPDLVLQNNYKWTCRLCLMVPPASPHIMPLGTHGVVR MRDKMXLXLQFYXAMSQNNQIPFSFIIPVIYDIAVNQTSVVQKESISSGP IVARAFQHTNQFSRSGQLNPQRCTILPIIHDLLMNFTLPNEGVMAGXPPP MGPGMMGPMMQRHPSPMGELTPLTMKRYRFIDIGANLTDLMYEGFYNGSN KHSPDLNTVIERSFTLGNLSKMILTAGNLEDSKKSLELAKKDDRMFSTIG VHPTRCSELKESKDVEGYLNSFSNIVKQNTNKIVALGEFGLDKERTHFCD FETQKKYFDMQLEHFGNNGCDLPLFLHSRNSSKELLEILNSHKSKFTKSG VVHSFDGSLEEANSILDAGYYIGINGCSCKTEENIEVIKELPIDKLMIET DCPWCEVRPSHAGHKYISTRFGDVPTVKKNNWKHGAIIKNRNEPMFIVQV LEIVAGVKGLNPQEVADVIFETTDRVFFQS back to top
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