EMLSAP00000004143, EMLSAP00000004143 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000004143
Unique NameEMLSAP00000004143
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length390
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40coord: 55..94
e-value: 5.4E-8
score: 42.6
coord: 165..204
e-value: 100.0
score: 4.3
coord: 207..246
e-value: 16.0
score: 9.4
coord: 14..52
e-value: 0.47
score: 19.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 61..94
e-value: 2.7E-9
score: 36.4
coord: 30..52
e-value: 0.068
score: 12.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 62..103
score: 14.753
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 30..248
e-value: 1.2E-31
score: 109.0
NoneNo IPR availablePANTHERPTHR12816RETINOBLASTOMA BINDING PROTEIN 5coord: 1..384
NoneNo IPR availablePANTHERPTHR12816:SF5RETINOBLASTOMA BINDING PROTEIN 5coord: 1..384
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 81..95
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 32..103
score: 16.823
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 30..263

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000004143 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000004143EMLSAT00000004143-699990Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000004143 ID=EMLSAP00000004143|Name=EMLSAP00000004143|organism=Lepeophtheirus salmonis|type=polypeptide|length=390bp
MNLELLESFGQNYPEENDGTLDCITMAIXCQFNRFGTLLAVGCNDGRLVI
WDFLTRGIAKIIQAHIHPVCSISWSRSGRQLASASTDNNVSIWDLLTGEC
EQRFPAXXVDLEDGSHRLIPLDDENDSQIVAXYDHRGKXIFTGNSKGKVS
IFNSSNLELITSFHPTQKLQDLVNRTMWKKCCFSGDGEYVCAGSARQHAL
YIWEKSVGNLVKILHGTKGEILMDVVWHPVRPIVASISQGVVTVWAQQQV
ENWSAFAPDFKELDENVDYEERESEFDVEDEDNSDEDEEDKNALLYLPTA
PEIEEPEEHWVHGVDGTNEDSSIKRTTSTDSKESSSPKKKKTKVTEVTLQ
NPPKDEVHPLLAKSSGKDKNLSNKRNSGRAKGKDKGKLNK
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