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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001508 | NMDA receptor | PRINTS | PR00177 | NMDARECEPTOR | coord: 357..385 score: 24.83 coord: 443..468 score: 15.77 coord: 514..541 score: 53.57 |
IPR001320 | Ionotropic glutamate receptor | SMART | SM00079 | PBPe | coord: 317..716 e-value: 3.9E-70 score: 249.0 |
IPR001320 | Ionotropic glutamate receptor | PFAM | PF00060 | Lig_chan | coord: 442..749 e-value: 1.5E-43 score: 147.9 |
IPR019594 | Glutamate receptor, L-glutamate/glycine-binding | SMART | SM00918 | Lig_chan-Glu_bd | coord: 327..387 e-value: 1.1E-20 score: 84.8 |
IPR019594 | Glutamate receptor, L-glutamate/glycine-binding | PFAM | PF10613 | Lig_chan-Glu_bd | coord: 332..387 e-value: 1.6E-21 score: 75.9 |
None | No IPR available | GENE3D | 3.40.190.10 | | coord: 314..440 e-value: 1.7E-37 score: 128.0 |
None | No IPR available | GENE3D | 1.10.287.70 | | coord: 441..590 e-value: 1.0E-44 score: 151.4 |
None | No IPR available | PANTHER | PTHR18966 | IONOTROPIC GLUTAMATE RECEPTOR | coord: 177..786 |
None | No IPR available | PANTHER | PTHR18966:SF21 | GLUTAMATE RECEPTOR 7 (AMPA) | coord: 177..786 |
None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..22 score: 0.602 |
None | No IPR available | SUPERFAMILY | 81324 | Voltage-gated potassium channels | coord: 439..545 |
None | No IPR available | SUPERFAMILY | 53850 | Periplasmic binding protein-like II | coord: 318..426 coord: 610..716 coord: 543..578 |
None | No IPR available | TMHMM | TMhelix | | coord: 518..540 |
None | No IPR available | TMHMM | TMhelix | | coord: 741..763 |
None | No IPR available | TMHMM | TMhelix | | coord: 443..461 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000004146 ID=EMLSAP00000004146|Name=EMLSAP00000004146|organism=Lepeophtheirus salmonis|type=polypeptide|length=798bp MQFLIQTLSIILPFLILKSKSANVNVLWINDKSTGLIKDSVDIALDYVKK KNNVVVTSLESVMMNGNDIGNSTDKVCNKLKTMLDEGRSPDMILDTTSAG TLSEVVKSLSLSLGIPTLSTSYGDLRDVSLESMYFYYYVHIYSTSTFFQD SNTNFKCECNKLDLIYIKPSKPKSGAIINTISKDSNIEPKIDVGFYFEVA VRGLLGVSNAKDKSDWPELSIQKCSEFQDGAPKERSNLDLLSYFKSADIP DAYDPLSYGQNDDEIFMKFGVTIEKMKFLNSKLVKKEYIGDWTAQVSQDL IQYKTGMSLQGVGAKTIYKIVSVMQAPFISKEMINGKAVYSGYCIDLINE LKELIEFEYEIYESPDGQYGRMDDNEEWNGMIRELIDKKADIALGALSVM AERENVIDFTVPYYDLVGIIIMMKKPKLPTSLFKFLSVLEDEVWICILAA YFATSFLMWIFDKYSPYSYQNNVEKYEDDDEKRYFNFKECLWFCLTSLTP QGGGEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLETPVESL EDLSKQYKIQYAPMNGSATMTYFERMAYIEDKFYEIWKDMSLNDSLSELE KSKLAVWDYPVSDKYTKMWQSMKEAKLPQTFEEALERVRQSPTSSEGFAF LGDATDIRYQVLTNCDLQMVGEEFSRKPYALAVQQGSPLKDQFNDAILKL LNQRKLETLKERWWNGNSNKKNCEEDDDSGGGISIYNIGGVFIVIFVGIG LAIITLIFEYWYYKYKVPQIQISDPNTKQLQIKQAHFRDKTDFSSTYK back to top
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