EMLSAP00000004146, EMLSAP00000004146 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000004146
Unique NameEMLSAP00000004146
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length798
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001508NMDA receptorPRINTSPR00177NMDARECEPTORcoord: 357..385
score: 24.83
coord: 443..468
score: 15.77
coord: 514..541
score: 53.57
IPR001320Ionotropic glutamate receptorSMARTSM00079PBPecoord: 317..716
e-value: 3.9E-70
score: 249.0
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 442..749
e-value: 1.5E-43
score: 147.9
IPR019594Glutamate receptor, L-glutamate/glycine-bindingSMARTSM00918Lig_chan-Glu_bdcoord: 327..387
e-value: 1.1E-20
score: 84.8
IPR019594Glutamate receptor, L-glutamate/glycine-bindingPFAMPF10613Lig_chan-Glu_bdcoord: 332..387
e-value: 1.6E-21
score: 75.9
NoneNo IPR availableGENE3D3.40.190.10coord: 314..440
e-value: 1.7E-37
score: 128.0
NoneNo IPR availableGENE3D1.10.287.70coord: 441..590
e-value: 1.0E-44
score: 151.4
NoneNo IPR availablePANTHERPTHR18966IONOTROPIC GLUTAMATE RECEPTORcoord: 177..786
NoneNo IPR availablePANTHERPTHR18966:SF21GLUTAMATE RECEPTOR 7 (AMPA)coord: 177..786
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.602
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 439..545
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 318..426
coord: 610..716
coord: 543..578
NoneNo IPR availableTMHMMTMhelixcoord: 518..540
NoneNo IPR availableTMHMMTMhelixcoord: 741..763
NoneNo IPR availableTMHMMTMhelixcoord: 443..461

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000004146 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000004146EMLSAT00000004146-699993Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000004146 ID=EMLSAP00000004146|Name=EMLSAP00000004146|organism=Lepeophtheirus salmonis|type=polypeptide|length=798bp
MQFLIQTLSIILPFLILKSKSANVNVLWINDKSTGLIKDSVDIALDYVKK
KNNVVVTSLESVMMNGNDIGNSTDKVCNKLKTMLDEGRSPDMILDTTSAG
TLSEVVKSLSLSLGIPTLSTSYGDLRDVSLESMYFYYYVHIYSTSTFFQD
SNTNFKCECNKLDLIYIKPSKPKSGAIINTISKDSNIEPKIDVGFYFEVA
VRGLLGVSNAKDKSDWPELSIQKCSEFQDGAPKERSNLDLLSYFKSADIP
DAYDPLSYGQNDDEIFMKFGVTIEKMKFLNSKLVKKEYIGDWTAQVSQDL
IQYKTGMSLQGVGAKTIYKIVSVMQAPFISKEMINGKAVYSGYCIDLINE
LKELIEFEYEIYESPDGQYGRMDDNEEWNGMIRELIDKKADIALGALSVM
AERENVIDFTVPYYDLVGIIIMMKKPKLPTSLFKFLSVLEDEVWICILAA
YFATSFLMWIFDKYSPYSYQNNVEKYEDDDEKRYFNFKECLWFCLTSLTP
QGGGEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLETPVESL
EDLSKQYKIQYAPMNGSATMTYFERMAYIEDKFYEIWKDMSLNDSLSELE
KSKLAVWDYPVSDKYTKMWQSMKEAKLPQTFEEALERVRQSPTSSEGFAF
LGDATDIRYQVLTNCDLQMVGEEFSRKPYALAVQQGSPLKDQFNDAILKL
LNQRKLETLKERWWNGNSNKKNCEEDDDSGGGISIYNIGGVFIVIFVGIG
LAIITLIFEYWYYKYKVPQIQISDPNTKQLQIKQAHFRDKTDFSSTYK
back to top
Add to Basket