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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 8..43 |
| None | No IPR available | PANTHER | PTHR24189:SF0 | SUBFAMILY NOT NAMED | coord: 1..1114 |
| None | No IPR available | PANTHER | PTHR24189 | FAMILY NOT NAMED | coord: 1..1114 |
| IPR002110 | Ankyrin repeat | PRINTS | PR01415 | ANKYRIN | coord: 468..483
score: 44.35
coord: 744..758
score: 35.84 |
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK | coord: 398..428
e-value: 900.0
score: 5.3
coord: 548..577
e-value: 0.024
score: 23.8
coord: 467..497
e-value: 0.098
score: 21.8
coord: 614..643
e-value: 0.7
score: 18.9
coord: 896..925
e-value: 0.034
score: 23.3
coord: 683..712
e-value: 26.0
score: 13.7
coord: 505..535
e-value: 0.52
score: 19.4
coord: 863..892
e-value: 8.1
score: 15.4
coord: 963..999
e-value: 1100.0
score: 4.6
coord: 828..857
e-value: 0.3
score: 20.2
coord: 296..327
e-value: 900.0
score: 5.3
coord: 929..959
e-value: 0.025
score: 23.8
coord: 1001..1033
e-value: 5.9
score: 15.8
coord: 728..757
e-value: 0.49
score: 19.4
coord: 263..292
e-value: 0.02
score: 24.0
coord: 647..675
e-value: 170.0
score: 10.7
coord: 761..790
e-value: 1.2E-4
score: 31.5
coord: 433..463
e-value: 1300.0
score: 4.2
coord: 581..610
e-value: 0.041
score: 23.0
coord: 364..394
e-value: 86.0
score: 12.0
coord: 330..360
e-value: 0.26
score: 20.4
coord: 794..823
e-value: 2100.0
score: 2.7 |
| IPR002110 | Ankyrin repeat | PFAM | PF00023 | Ank | coord: 263..294
e-value: 3.2E-4
score: 20.2 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 929..962
score: 10.873 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 896..928
score: 10.553 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 548..580
score: 11.274 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 761..793
score: 12.85 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 1001..1033
score: 9.324 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 728..760
score: 9.19 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 467..489
score: 9.458 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 330..363
score: 9.831 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 263..295
score: 11.942 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 863..895
score: 8.79 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 614..646
score: 9.271 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 581..613
score: 11.114 |
| IPR000306 | FYVE zinc finger | SMART | SM00064 | FYVE | coord: 1057..1113
e-value: 3.8E-6
score: 36.4 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 517..697
e-value: 1.8E-37
score: 128.2
coord: 698..1041
e-value: 1.0E-69
score: 234.5
coord: 231..516
e-value: 2.2E-47
score: 160.9 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 302..386
e-value: 3.3E-9
score: 36.8
coord: 411..490
e-value: 1.9E-7
score: 31.2
coord: 688..792
e-value: 2.5E-16
score: 59.6
coord: 868..956
e-value: 3.2E-15
score: 56.1
coord: 543..611
e-value: 1.1E-10
score: 41.5 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 232..1041
score: 132.171 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 505..712 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 231..526 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 679..950 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 912..1037 |
| IPR013069 | BTB/POZ | PFAM | PF00651 | BTB | coord: 68..170
e-value: 2.0E-6
score: 27.6 |
| IPR011333 | BTB/POZ fold | GENE3D | 3.30.710.10 | | coord: 54..170
e-value: 1.8E-10
score: 40.1 |
| IPR011333 | BTB/POZ fold | SUPERFAMILY | 54695 | POZ domain | coord: 54..171 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 1075..1111
e-value: 1.8E-7
score: 30.5 |
| IPR011011 | Zinc finger, FYVE/PHD-type | SUPERFAMILY | 57903 | FYVE/PHD zinc finger | coord: 1062..1111 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000004309 ID=EMLSAP00000004309|Name=EMLSAP00000004309|organism=Lepeophtheirus salmonis|type=polypeptide|length=1119bp
MSEKSDELSKVQGHLQLLRSEYVKLQNKCSALEKENALLKASHGGLSAGG
IAEXNSFPVRLLETARGLYNSQQYSDLEIKLSDQQLFAHKFIFKTRGQRW
RGKDIDNEDLHCLDWSDLDSKVGVALIKWIYTDHINFSDYDDSFLLDLMK
GADIFGFLRLQTQCETSLISSVGPHNCIRYFATAEEIYAEDLKRHCSNLI
STHWNEFSKEDFSHLQGPLLYSMLKSKIQYTLHYAIKIHREDVVFLYLIE
PKSAEGVNALDDNGELPLDLALRSGQKSLAQSLVEHGANVNQLNQDGVPL
LNLAISRGDIFSSEFLIDNGAFSKLTSSSDGNHPLHXVAKDPQMISIASK
LIAKGADINCINHSSMTPLHLCLESKNKDFFDYLTSLNDLKFEEKNINGL
PPLWFALQDEDNFSFAEGLCSKGISLNTVCNSNGDSLLHLLANADLEKSC
MFLINSSGCQTNLANIHGNTVLHLAAENGLLELAEALLEGPNASKEIIES
QNVPDRQTPLHLAISKSHKTVVNAILAFCSTNCKEKNEATNFNLKNSFGQ
TPLSLALSKNLHEVAMRLIESGANVNICDSTGLTLLHLAIMDGNESGSIF
LMNHGADIDMRTSNGETPLELAIANRLPIVLETLCRKGANLSSSTSTGDP
PLWMALQASLDLAHVLLRYGVDTDSWSVGPGGCYQTLLHRAIDENMDEAA
KFLIRSGCDLLSPRKLGPNGQGGEEARDMSSPLNLCCRWGQAGIVEVLLE
HEAPINSRDAEGKTPIHVAIEEGDTSIINILLDHQPNLTLRDNSGVTPFA
SAITFKNNKAAQKILDIEPTAAEIYDSRGRNFLHTAILRKDLESVLFLIS
IKANIHSITQDSNRLSPLLLAVQLGNDMIVRNLLLAGASVSDVSGCGQTA
LHIASEHNFPLIVGILLSNGIDFTIVDNRGNNALHIAVKEGHSEVVRTLL
LESQIDAEALNNKGRNPLHILANFGGDSSSKIFDIFLKYMHDYPIDKPDA
EGNTPLLLAYMKGNGNLCRSLVKXGAILGSINHDGVSLFNYKVATKQLLF
KLLDCLDNEPKWGEGDVCQECSENRHCGRLLCSKCSDKHMPILKYNLPKP
VRVCDVCADILTIGPVFTT back to top
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