EMLSAP00000004451, EMLSAP00000004451 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000004451
Unique NameEMLSAP00000004451
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length522
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001723Steroid hormone receptorPRINTSPR00398STRDHORMONERcoord: 417..432
score: 34.31
coord: 479..496
score: 23.8
coord: 216..226
score: 42.18
coord: 350..366
score: 40.16
coord: 329..350
score: 29.09
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 171..186
score: 57.32
coord: 212..220
score: 53.58
coord: 155..171
score: 54.03
coord: 204..212
score: 54.12
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399ZnF_C4coord: 152..223
e-value: 8.3E-37
score: 138.3
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 154..221
e-value: 4.7E-28
score: 97.1
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 155..181
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 152..227
score: 19.783
IPR000536Nuclear hormone receptor, ligand-binding, coreSMARTSM00430HOLIcoord: 328..491
e-value: 1.7E-32
score: 124.0
IPR000536Nuclear hormone receptor, ligand-binding, corePFAMPF00104Hormone_recepcoord: 309..490
e-value: 2.3E-26
score: 92.1
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 217..519
e-value: 5.0E-61
score: 205.9
IPR008946Nuclear hormone receptor, ligand-bindingSUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 277..519
coord: 202..236
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 151..216
e-value: 1.6E-29
score: 101.4
NoneNo IPR availablePANTHERPTHR24086:SF0SUBFAMILY NOT NAMEDcoord: 90..519
NoneNo IPR availablePANTHERPTHR24086FAMILY NOT NAMEDcoord: 90..519
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 151..229

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000004451 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000004451EMLSAT00000004451-700298Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000004451 ID=EMLSAP00000004451|Name=EMLSAP00000004451|organism=Lepeophtheirus salmonis|type=polypeptide|length=522bp
MALLSFKKENSSSSLEAMDLSSNIQVKKRKTFLEEKRHESFANSALHRLA
EAAERKQIEDELMELEGSKGFSGDPSSHHYLLSNSHHPDSSSEPYILCSS
SSLNRKNSDASQCSSRTNSPKIEEDPQLTIESHSSYSTHLNTSGISRQQL
INSPCPVCGDKISGFHYGIFSCESCKGFFKRTVQNKKNYVCLRGSQCPVT
ISTRKKCPACRFDKCLNIGMKLEAIREDRTRGGRSTYQCSYNLPTTGVCS
TNSTTIPTIKRESRGDDHNTETKVNQSSGIPVLLHEIMSVEHLWFWSTSM
PSLSLNNSSSNTDTSQESPSNPVQTLTLLADKRLYKLVRWCKSLPLFKNI
LVDDQITLLINAWCELLVFSCCYKSVDSPGFIRLSQDKSLNLESAKSLGV
NECIEKMLNFSDQLRRLKVDHYEYVSLKVILLLTSAPLYVDATGLKEVDQ
VRESQEQVVQALQSYTNFHYPSMPNKFGELLLRMPELQRVCQVSKDMLQP
SQGSGETSPGFNLLMELLRGDH
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