EMLSAP00000004629, EMLSAP00000004629 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000004629
Unique NameEMLSAP00000004629
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length471
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001781Zinc finger, LIM-typeSMARTSM00132LIMcoord: 296..347
e-value: 2.4E-16
score: 70.3
coord: 355..406
e-value: 1.0E-18
score: 78.2
coord: 237..288
e-value: 2.8E-21
score: 86.7
coord: 414..465
e-value: 1.2E-16
score: 71.3
IPR001781Zinc finger, LIM-typePFAMPF00412LIMcoord: 356..409
e-value: 4.3E-15
score: 55.3
coord: 415..469
e-value: 7.4E-12
score: 45.0
coord: 238..290
e-value: 1.2E-16
score: 60.4
coord: 297..351
e-value: 6.5E-13
score: 48.4
IPR001781Zinc finger, LIM-typeGENE3D2.10.110.10coord: 296..354
e-value: 1.4E-17
score: 63.0
coord: 409..470
e-value: 2.6E-19
score: 68.5
coord: 231..295
e-value: 4.2E-23
score: 80.7
IPR001781Zinc finger, LIM-typeGENE3D2.10.110.10coord: 355..408
e-value: 3.3E-19
score: 68.3
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 356..389
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 238..271
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 415..448
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 297..330
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 414..471
score: 10.098
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 296..353
score: 8.009
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 236..295
score: 14.048
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 354..413
score: 14.266
NoneNo IPR availablePANTHERPTHR24216FAMILY NOT NAMEDcoord: 199..471
NoneNo IPR availablePANTHERPTHR24216:SF0SUBFAMILY NOT NAMEDcoord: 199..471
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 323..385
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 441..471
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 237..262
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 264..327
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 382..444

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000004629 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000004629EMLSAT00000004629-700476Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000004629 ID=EMLSAP00000004629|Name=EMLSAP00000004629|organism=Lepeophtheirus salmonis|type=polypeptide|length=471bp
MNESTSLSPDLDSLLGDLERSIQERVTKKGVIPPEDYVVLTSETQNQEEY
MSTTECGIPIEKMREHSYLNPSPSSPIHQNINELDILLNDLSNAKYNSTT
STSSQRKEVLEMKTTTRVQEIAEYSVIEKKKPEILSKDSVQRTPEKDALH
RELALKNGSVIENGNQWGYLGYGVWENNKGASSATQELDHLMNSLNTFQI
KDGPQPEMPVNTSLDVMLGDLRENLDRQGVRTTQKGSCFACQKPIIGQVI
TALGKMWHPEHFTCHHCNDELGTMNFFEREGKPYCEKDYHCLFSPKCKAC
GEAILDKCISALESTWHPEHFNCFSCKGPFGEDGFHEHEGTAYCRGCFFG
NFAPKCGGCDGPILDQYISSLNAQWHRDCFVCAECQCSFSDGNYFEHGGK
PYCETHYHALRGSLCAGCHKAIQGRCITAMFRKFHPEHFVCSFCLKQLNK
GTFKEQGDKPYCHECYDRLFG
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