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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001757 | Cation-transporting P-type ATPase | PRINTS | PR00119 | CATATPASE | coord: 585..595 score: 63.51 coord: 355..369 score: 47.25 coord: 195..209 score: 46.33 coord: 563..574 score: 38.59 coord: 675..694 score: 62.97 coord: 699..711 score: 54.98 |
IPR001757 | Cation-transporting P-type ATPase | TIGRFAM | TIGR01494 | TIGR01494 | coord: 117..377 e-value: 8.6E-28 score: 94.8 coord: 649..763 e-value: 2.2E-27 score: 93.5 |
None | No IPR available | PRINTS | PR00121 | NAKATPASE | coord: 911..935 score: 43.91 coord: 876..896 score: 38.98 coord: 111..131 score: 51.16 coord: 481..499 score: 64.5 coord: 814..834 score: 49.72 coord: 84..98 score: 31.63 coord: 348..369 score: 64.48 coord: 747..768 score: 46.83 |
None | No IPR available | GENE3D | 4.10.6.10 | | coord: 116..147 e-value: 1.9E-8 score: 33.2 |
None | No IPR available | PFAM | PF13246 | Hydrolase_like2 | coord: 404..496 e-value: 2.1E-13 score: 49.9 |
None | No IPR available | PANTHER | PTHR24093 | FAMILY NOT NAMED | coord: 1..985 |
None | No IPR available | PANTHER | PTHR24093:SF58 | SUBFAMILY NOT NAMED | coord: 1..985 |
None | No IPR available | SUPERFAMILY | 81665 | Calcium ATPase, transmembrane domain M | coord: 725..974 coord: 256..349 coord: 22..148 |
None | No IPR available | SUPERFAMILY | 81653 | Calcium ATPase, transduction domain A | coord: 148..253 |
None | No IPR available | TMHMM | TMhelix | | coord: 944..961 |
None | No IPR available | TMHMM | TMhelix | | coord: 84..106 |
None | No IPR available | TMHMM | TMhelix | | coord: 285..307 |
None | No IPR available | TMHMM | TMhelix | | coord: 812..834 |
None | No IPR available | TMHMM | TMhelix | | coord: 111..130 |
None | No IPR available | TMHMM | TMhelix | | coord: 917..939 |
None | No IPR available | TMHMM | TMhelix | | coord: 874..896 |
None | No IPR available | TMHMM | TMhelix | | coord: 748..770 |
IPR004014 | Cation-transporting P-type ATPase, N-terminal | SMART | SM00831 | Cation_ATPase_N | coord: 23..97 e-value: 1.4E-5 score: 34.6 |
IPR004014 | Cation-transporting P-type ATPase, N-terminal | PFAM | PF00690 | Cation_ATPase_N | coord: 25..90 e-value: 2.5E-11 score: 42.7 |
IPR008250 | P-type ATPase, A domain | GENE3D | 2.70.150.10 | | coord: 33..77 e-value: 6.6E-37 score: 125.8 coord: 148..253 e-value: 6.6E-37 score: 125.8 |
IPR008250 | P-type ATPase, A domain | PFAM | PF00122 | E1-E2_ATPase | coord: 118..347 e-value: 2.1E-51 score: 174.0 |
IPR023299 | P-type ATPase, cytoplasmic domain N | GENE3D | 3.40.1110.10 | | coord: 346..564 e-value: 4.9E-44 score: 150.0 |
IPR023299 | P-type ATPase, cytoplasmic domain N | SUPERFAMILY | 81660 | Metal cation-transporting ATPase, ATP-binding domain N | coord: 364..571 |
IPR023214 | HAD-like domain | PFAM | PF00702 | Hydrolase | coord: 558..686 e-value: 3.5E-18 score: 66.6 |
IPR023214 | HAD-like domain | SUPERFAMILY | 56784 | HAD-like | coord: 511..779 coord: 353..373 |
IPR005775 | Sodium/potassium-transporting P-type ATPase, subfamily IIC | TIGRFAM | TIGR01106 | TIGR01106 | coord: 15..983 e-value: 0.0 score: 1079.1 |
IPR006068 | Cation-transporting P-type ATPase, C-terminal | PFAM | PF00689 | Cation_ATPase_C | coord: 759..969 e-value: 1.2E-34 score: 119.3 |
IPR023298 | P-type ATPase, transmembrane domain | GENE3D | 1.20.1110.10 | | coord: 565..977 e-value: 1.6E-75 score: 253.8 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000004663 ID=EMLSAP00000004663|Name=EMLSAP00000004663|organism=Lepeophtheirus salmonis|type=polypeptide|length=985bp MPRLEKDKVQILFNEASGEYDIDAHKISIEELCERNGTDPLNGLTEAKVR ENRSTYGYXTLSPXSSSSGCIKFLKNFFNPFATLVWVQALFYFLSFIFIA FIFGTTSLDKVLLAIVSLAVVIVNGCISYIQDVKTARVLKSLKKMASQYS FCVRDGKTVEIRSEEVTVGDIVVLKSGDFIPGDIRVIEATNFKVDNSHVT GESGPQERFPELTHPNPFQTKNLIFFSTYVIEGTAKGIVVNTGNHTFVGQ LVKYTGKFKSRKSTFTYEIRHFISRLSKAGRRISIIAFIFAFITGSHWLN GFILTIAVFMVNIPEGLLISTTTSLIQAAKRISLKNGVVKNLETVETLGS TSVICVDKARTLDQNKIIVAHACLHDEITEIDLSLEKSPNSSLEGWKFLE RSAALCNTAEFLPDQESVPILGRKFNGSAIEGALLMFAAQTIGNVNQVRS EKAKICEVTTSSKYQLSIHKTNDFSDKGALLVMKGEPEEILQRCTTTLID GEESLLFPELRSRVMQSYFELLRRGEYVLGFCDFNLPLDSYPSEYPFNVE DINFPTEGLRFLGMISMVNPPRATVPNAIAKCRSAGIRIIMMTGDAEVAA EVFARNVGIISGDTENDSTGVAAVVLGDQLTQMPEKEIESLIQQYPELVF ARINPQQKVAIVQACQRIGWIVAXTGDGVNDAPVLRTSNIGIALGTSGSD IAKEAADMILLDDDFSSIVSGIEEGRLAFDNLKKTFAYSLSSNIPQLAPF IVFILCDIPMPLSVIAILILDLGIDMIPSIFLSNESAEHDLMKLSPRNPY TQKLTSSNMFRLAYHHIGLIEAGAALFAYFTIMASNGFFPSILLGSRRLW ESKDINDLMDSYGQEWTYLQRNNLLQTSQTGYFTSIAVTQCVNLILSKTR RNSIFTQGMKQNKLLNFGCFFQILLVLLLVYIPGMDISFGMHPLRISFWL VPLLFAFFLFIHEESRKYFIRNYGKENWVKTEFGY back to top
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