EMLSAP00000004952, EMLSAP00000004952 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000004952
Unique NameEMLSAP00000004952
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1579
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 648..669
NoneNo IPR availablePANTHERPTHR10037VOLTAGE-GATED CATION CHANNEL (CALCIUM AND SODIUM)coord: 38..1483
NoneNo IPR availablePANTHERPTHR10037:SF50VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE D-RELATEDcoord: 38..1483
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 701..838
coord: 878..956
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 1003..1250
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 67..226
coord: 268..292
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 402..558
NoneNo IPR availableTMHMMTMhelixcoord: 1005..1024
NoneNo IPR availableTMHMMTMhelixcoord: 801..823
NoneNo IPR availableTMHMMTMhelixcoord: 1131..1150
NoneNo IPR availableTMHMMTMhelixcoord: 927..949
NoneNo IPR availableTMHMMTMhelixcoord: 108..127
NoneNo IPR availableTMHMMTMhelixcoord: 69..88
NoneNo IPR availableTMHMMTMhelixcoord: 1073..1095
NoneNo IPR availableTMHMMTMhelixcoord: 698..720
NoneNo IPR availableTMHMMTMhelixcoord: 197..219
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 1224..1246
NoneNo IPR availableTMHMMTMhelixcoord: 473..495
NoneNo IPR availableTMHMMTMhelixcoord: 525..547
NoneNo IPR availableTMHMMTMhelixcoord: 1034..1052
NoneNo IPR availableTMHMMTMhelixcoord: 756..778
IPR002077Voltage-dependent calcium channel, alpha-1 subunitPRINTSPR00167CACHANNELcoord: 951..971
score: 61.83
coord: 188..203
score: 58.5
coord: 1121..1135
score: 92.81
coord: 1169..1181
score: 53.37
IPR014873Voltage-dependent calcium channel, alpha-1 subunit, IQ domainSMARTSM01062Ca_chan_IQcoord: 1385..1419
e-value: 2.3E-7
score: 40.5
IPR014873Voltage-dependent calcium channel, alpha-1 subunit, IQ domainPFAMPF08763Ca_chan_IQcoord: 1386..1416
e-value: 1.1E-9
score: 37.2
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 1038..1246
e-value: 7.5E-58
score: 194.9
coord: 106..294
e-value: 1.7E-42
score: 144.8
coord: 735..949
e-value: 4.8E-39
score: 133.5
coord: 403..501
e-value: 1.3E-19
score: 70.1
IPR027359Voltage-dependent channel, four helix bundle domainGENE3D1.20.120.350coord: 58..180
e-value: 6.6E-21
score: 73.8
coord: 994..1111
e-value: 2.6E-23
score: 81.7
coord: 740..791
e-value: 5.5E-10
score: 38.3
coord: 400..454
e-value: 1.1E-6
score: 27.6

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000004952 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000004952EMLSAT00000004952-700799Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000004952 ID=EMLSAP00000004952|Name=EMLSAP00000004952|organism=Lepeophtheirus salmonis|type=polypeptide|length=1579bp
MPNKGQTKDEDTASEFEKLQEEILKATPQTKRIQVGAKPQVERIERSIYL
FSLKNPIRLKCITVVEWKAFEFFILATILATCVSLALHKPYPNGDTNDLN
LFLEKIEVIFMVIFTGECVIKIVAYGLYQHEEAYLRNTWNFIDFSIVMIG
FMDILLSSLSIEGFDVKALRAFRVLRPLRLVSGVPSLQVVLNAILMAIFP
LFHIALLVLFVIIIYSIIGLQMFQGLMHKACFDNITGVLIDDDPRLCGGN
YQCETGVCREYIPGPNFGITNFDNFILSMLTVFQCITLEGFMTQWEAPGN
GRILEFSKERTKTTSRGIYQKAKMLEQMNDDMKGYMDWLLIAEXLEPLQY
KRSAEASSDEKKGIDPLQLKQTLHTSKLAKLAKINRKFRRACRKAVKSQV
MFWNYFISLFNRFDCFVVLSSILELVLTRTHIMPPLGMSVLRCIRLLRAF
KVTRYWTSLKNLLKSLINSIEAIFSLIVLLFLFLGIYALLGSQLFGGKFX
ERILTGEDWNAVMYDGILAYGGPQTVLGMFASLYFITLFIIGNYILLNVF
LAIAVDNLAGDDDDEEXETPVVKDPEPAFAPAQQDPSRPPPPGTQIPHER
EDLLMMIDNHHLYNYDPGYEDEYNPYLNSNGYDHYNDYNQMVNNNGPIKS
LEEKLEEEKANEEAFLEDDDNKKDPIPPFSSLFIFSPTNRFRVLCYNFCN
HAYFANFILVCIMVSSASLAAEDPLHSKSPRNIVIAYGAVGHKGAYARYP
ANILDLVVVSVSIISIAFRDSAGAISVLKILRVLRVLRPLRAVNRAKGLK
LVIXAVIVSVSTIQNIVLVTVLLQFLFAVIGVQLFKGKFYSCSDSSKMTE
EECQGQYVDFKKSDWAQPTVLEREWSLNDFHYDNVAKGMLTLFVVSTFEG
WPGILYTSLDSHAEDTGPLPISRPSMFIFYIVYIIIIAFFMVNIFVGFVI
VTFQKEGESPFANCELDKNQRNCIDYTLNAKPARLYLPSDPVQYRIWAWA
XSSKFEYVVFGAILLNTISLAMSFYNQPQIYSDFLDLLNYIFTIFFALEF
VIKMAAFRPKEYFCDPWNTFDCIIVIGSFIDIGMSSLGSGDGGGISINFF
RLFRALRLVKLLSKDESIRTLLWTFIKSFQALPYVMLLIALVFFIYGVVG
MQVFGKIAINEDTSIHSNNNFQNFQSALIVLFRSATGEAWQDIMLSCIPS
PDVECDEESEEAGNPAGCGSIIAYPYFISFFIATSFLILNLFVAVIMDNF
DYLTRDWSILGAHHLDEFVNLWSEYDPDAKGCIKHMDVVQLLRKINPPLG
FGKLCPHRNACKRLVAMNMPLRDDGTVEFQATLFAIIRTSLGIKMEGSLE
XANSELRLIMKKIWRKDDSVLDKLIPRKRGESEFGNDVAVGKFYATVLIQ
DCFRRFAKKRFEKERQVRRDIEVANTKTLMAGLRELHDAGPNLKRAISGN
LEAMVAEEPLTPTNETNPYYRRGSPLFGVSARVHDVDLFNPDFRKSPPKA
PARKKPGIKRTESLTPSDAGELLVSKILAREGLSKFSGDATFVRNTRMEI
QSSMNMNTEEFNFAAQKLLDNPNTPIRLK
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