EMLSAP00000005221, EMLSAP00000005221 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000005221
Unique NameEMLSAP00000005221
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length669
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003392PatchedPFAMPF02460Patchedcoord: 30..611
e-value: 3.1E-76
score: 256.8
NoneNo IPR availableGENE3D1.20.1640.10coord: 29..209
e-value: 2.1E-23
score: 81.9
coord: 450..617
e-value: 1.0E-26
score: 92.8
NoneNo IPR availablePANTHERPTHR10796PATCHED-RELATEDcoord: 29..618
NoneNo IPR availablePANTHERPTHR10796:SF77SUBFAMILY NOT NAMEDcoord: 29..618
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 29..201
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 437..612
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 71..93
NoneNo IPR availableTMHMMTMhelixcoord: 517..539
NoneNo IPR availableTMHMMTMhelixcoord: 103..120
NoneNo IPR availableTMHMMTMhelixcoord: 461..483
NoneNo IPR availableTMHMMTMhelixcoord: 178..200
NoneNo IPR availableTMHMMTMhelixcoord: 240..262
NoneNo IPR availableTMHMMTMhelixcoord: 485..507
NoneNo IPR availableTMHMMTMhelixcoord: 589..611
NoneNo IPR availableTMHMMTMhelixcoord: 39..58
NoneNo IPR availableTMHMMTMhelixcoord: 552..574
IPR000731Sterol-sensing domainPROSITEPS50156SSDcoord: 485..610
score: 11.839
IPR000731Sterol-sensing domainPROSITEPS50156SSDcoord: 40..200
score: 32.331

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000005221 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000005221EMLSAT00000005221-701068Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000005221 ID=EMLSAP00000005221|Name=EMLSAP00000005221|organism=Lepeophtheirus salmonis|type=polypeptide|length=669bp
MKNNASDYVEGDLPRDWVAEDWEKNLINFQDEIVTSIDGGMYVFGVGFLL
ILIYSLLVTSDFHPVNQRVMLLLLGFMVIGMAIGSSFGLGFHIGIIYADL
HPIIPFLLLGIGVDDLFIIIKSTDNLSQKEKELPLKERIALVVQHSGVSI
TVTSLTDLVAFLISSTTSIPLLRAFCLSVALGISFLYFFVVTFFIAWYTL
DERRIEEGKAFLWFTKRVHSVPPKKSTWTHNLYKKYYVEYLFAIPSQLIL
GGISLLVFGFGIFGTFNIQQDYDPITYMRQNSYQVKFIEAKNRLYPEFGD
IVDIYVGNIPYWENIQEMKQIDSLVNNCQYVRTGSHSLYWFKHVIDVCES
EGFNCSTEFDFKKAIVFSLALKPFIFADLKLNITILEEFQDFQDLKWHIQ
SSKSTFQYGHLESISVQTKAMDEIILGLEKIIFEDSDFVSPISRSLAFHQ
WTANKVISKELIRNMSLNFACITIVLFMLLANIQLSLIVLFTVAMTITEI
AGFAYFVGLNIEIVTSLELILSVGLVLDYSAHIGVCYTIQKTGSRRERSQ
RALLDMGPAIFSGGFSTFLAFVVLFFNDSYIFTSFCHMLGFGVLFGLWNA
LVFMPLLLSYFGPLTEEELKTVSPXPSVGRVNMAFPCSNSDIAPXXSFQA
FVTSLNMVLLSNPIIMSSS
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