EMLSAP00000005242, EMLSAP00000005242 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000005242
Unique NameEMLSAP00000005242
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length578
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 245..268
score: 24.16
coord: 114..135
score: 39.82
coord: 492..518
score: 31.35
coord: 195..216
score: 23.19
coord: 159..181
score: 36.32
coord: 81..105
score: 23.12
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 97..510
e-value: 2.7E-55
score: 187.2
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 165..181
NoneNo IPR availableGENE3D1.20.1070.10coord: 432..540
e-value: 2.4E-79
score: 265.9
coord: 71..281
e-value: 2.4E-79
score: 265.9
NoneNo IPR availablePANTHERPTHR24249HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTORcoord: 45..539
NoneNo IPR availablePANTHERPTHR24249:SF34OCTOPAMINE RECEPTORcoord: 45..539
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.734
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 448..540
coord: 45..279
NoneNo IPR availableTMHMMTMhelixcoord: 246..268
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 198..220
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 96..510
score: 30.001

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000005242 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000005242EMLSAT00000005242-701089Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000005242 ID=EMLSAP00000005242|Name=EMLSAP00000005242|organism=Lepeophtheirus salmonis|type=polypeptide|length=578bp
MYGLIVILTFIASIKLTISDSVTPSINIISSIKPLTELNDSIREPNSVIR
NNSSLAYNTVYESDTGGSPDDESLDTLFLVLKSGILILIIILAIFNNLLV
VISVFRYHRLRHINNYFLVSLAVADLLVACFAMTFNALVEITGEWNFGYI
ICDLWNSLDVHFSTVSTLHLCCISVDRYFAIVKPLKYTSYMTVKVAAVMI
GVAWTAPTLISFLPIFLGWYTTKEHLEWRKQNPDECIFKVNQPYAFISSA
LTFWAPVAIMLCMYHRIYKEALRQKESIRRSSVPSQQHLIIDSDRVRTRF
NELQANGFKSGTDSSGNITLHEIHSNNNYNRYPPNRLGVPASTSSYRISP
STEDESLPLNVSSSTKKETKFVEGNFSMTLSRCASPTPSRNCSLTPPASN
NLLSVINAKARRVSMAHSINSDDSTTSSKVLCNRKNRIELSEKMTSIFEG
EIASPLGVWTIGQGVLERQVQIKYLTVAICGDEQCPCPRIVVSILFWIGY
FNSTLNPVIYVMTNRDFKDAFSDILRKTFCWFRSRVEHSQKEWSVLMFDG
ICSLDLLTLSFHKIYFLKASNLFLNYDI
back to top
Add to Basket