EMLSAP00000006340, EMLSAP00000006340 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000006340
Unique NameEMLSAP00000006340
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length2344
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1860..1888
NoneNo IPR availableCOILSCoilCoilcoord: 2206..2214
NoneNo IPR availableCOILSCoilCoilcoord: 2201..2205
NoneNo IPR availableCOILSCoilCoilcoord: 1763..1784
NoneNo IPR availableCOILSCoilCoilcoord: 2267..2325
NoneNo IPR availableCOILSCoilCoilcoord: 2018..2081
NoneNo IPR availableCOILSCoilCoilcoord: 1825..1853
NoneNo IPR availableCOILSCoilCoilcoord: 2228..2249
NoneNo IPR availableCOILSCoilCoilcoord: 2186..2200
NoneNo IPR availablePRINTSPR00011EGFLAMININcoord: 1710..1728
score: 49.28
coord: 1662..1680
score: 50.96
coord: 1613..1631
score: 48.56
coord: 1681..1709
score: 34.95
NoneNo IPR availableGENE3D2.10.25.10coord: 292..346
e-value: 4.0E-14
score: 51.8
coord: 1430..1478
e-value: 1.3E-12
score: 47.0
coord: 1534..1581
e-value: 3.8E-14
score: 51.8
coord: 1033..1085
e-value: 2.6E-5
score: 23.5
NoneNo IPR availableGENE3D2.10.25.10coord: 1480..1533
e-value: 2.3E-12
score: 46.1
NoneNo IPR availableGENE3D2.10.25.10coord: 1698..1752
e-value: 5.6E-12
score: 44.9
coord: 1593..1649
e-value: 8.7E-12
score: 44.2
coord: 1650..1697
e-value: 1.6E-13
score: 49.8
coord: 1094..1142
e-value: 3.0E-12
score: 45.7
coord: 1143..1197
e-value: 5.6E-12
score: 44.8
NoneNo IPR availablePANTHERPTHR10574:SF113LAMININ SUBUNIT GAMMAcoord: 17..2332
NoneNo IPR availablePANTHERPTHR10574FAMILY NOT NAMEDcoord: 17..2332
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..15
score: 6.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.707
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 1496..1538
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 1536..1582
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 1650..1691
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 1431..1482
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 1698..1738
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 294..345
NoneNo IPR availableSUPERFAMILY48726Immunoglobulincoord: 902..978
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 1095..1144
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 1142..1197
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 1595..1647
IPR008211Laminin, N-terminalSMARTSM00136LamNTcoord: 36..292
e-value: 7.2E-87
score: 304.6
IPR008211Laminin, N-terminalPFAMPF00055Laminin_Ncoord: 42..292
e-value: 1.5E-68
score: 230.2
IPR008211Laminin, N-terminalPROSITEPS51117LAMININ_NTERcoord: 38..293
score: 43.695
IPR018031Laminin B, subgroupSMARTSM00281LamBcoord: 1257..1385
e-value: 1.4E-22
score: 91.0
IPR002049EGF-like, lamininSMARTSM00180EGF_Lamcoord: 1698..1755
e-value: 8.0E-9
score: 45.3
coord: 1095..1139
e-value: 1.4E-10
score: 51.2
coord: 294..351
e-value: 5.9E-6
score: 35.8
coord: 1595..1647
e-value: 6.5E-12
score: 55.6
coord: 1034..1092
e-value: 0.33
score: 17.4
coord: 1480..1533
e-value: 1.6E-5
score: 34.3
coord: 1536..1592
e-value: 8.1E-9
score: 45.3
coord: 1431..1477
e-value: 7.3E-10
score: 48.8
coord: 1142..1192
e-value: 1.7E-9
score: 47.5
coord: 1650..1695
e-value: 7.0E-11
score: 52.2
IPR002049EGF-like, lamininPFAMPF00053Laminin_EGFcoord: 1650..1695
e-value: 3.1E-9
score: 36.4
coord: 1142..1192
e-value: 4.1E-7
score: 29.7
coord: 1595..1647
e-value: 2.3E-8
score: 33.7
coord: 1480..1524
e-value: 0.032
score: 14.0
coord: 1431..1477
e-value: 1.7E-8
score: 34.1
coord: 1698..1738
e-value: 4.1E-10
score: 39.3
coord: 1095..1139
e-value: 4.1E-8
score: 32.9
coord: 1536..1581
e-value: 7.6E-9
score: 35.2
coord: 294..351
e-value: 4.0E-6
score: 26.5
IPR002049EGF-like, lamininPROSITEPS01248EGF_LAM_1coord: 1500..1536
IPR002049EGF-like, lamininPROSITEPS01248EGF_LAM_1coord: 1447..1482
IPR002049EGF-like, lamininPROSITEPS01248EGF_LAM_1coord: 1163..1197
IPR002049EGF-like, lamininPROSITEPS01248EGF_LAM_1coord: 1557..1592
IPR002049EGF-like, lamininPROSITEPS01248EGF_LAM_1coord: 1113..1144
IPR002049EGF-like, lamininPROSITEPS01248EGF_LAM_1coord: 1398..1431
IPR002049EGF-like, lamininPROSITEPS01248EGF_LAM_1coord: 1620..1652
IPR002049EGF-like, lamininPROSITEPS01248EGF_LAM_1coord: 1669..1700
IPR002049EGF-like, lamininPROSITEPS01248EGF_LAM_1coord: 317..351
IPR002049EGF-like, lamininPROSITEPS50027EGF_LAM_2coord: 1536..1594
score: 12.997
IPR002049EGF-like, lamininPROSITEPS50027EGF_LAM_2coord: 1698..1751
score: 15.453
IPR002049EGF-like, lamininPROSITEPS50027EGF_LAM_2coord: 1142..1194
score: 16.063
IPR002049EGF-like, lamininPROSITEPS50027EGF_LAM_2coord: 1095..1141
score: 16.919
IPR002049EGF-like, lamininPROSITEPS50027EGF_LAM_2coord: 294..353
score: 9.17
IPR002049EGF-like, lamininPROSITEPS50027EGF_LAM_2coord: 1650..1697
score: 20.157
IPR002049EGF-like, lamininPROSITEPS50027EGF_LAM_2coord: 1431..1479
score: 18.195
IPR002049EGF-like, lamininPROSITEPS50027EGF_LAM_2coord: 1480..1535
score: 10.045
IPR002049EGF-like, lamininPROSITEPS50027EGF_LAM_2coord: 1595..1649
score: 16.063
IPR000742Epidermal growth factor-like domainSMARTSM00181EGFcoord: 1141..1175
e-value: 130.0
score: 3.1
coord: 1549..1593
e-value: 3.7
score: 16.5
coord: 1476..1513
e-value: 0.047
score: 22.8
coord: 1646..1681
e-value: 160.0
score: 2.3
IPR003599Immunoglobulin subtypeSMARTSM00409IGcoord: 903..990
e-value: 0.0012
score: 28.1
IPR001627Sema domainSMARTSM00630Semacoord: 395..833
e-value: 8.9E-149
score: 510.2
IPR001627Sema domainPFAMPF01403Semacoord: 395..833
e-value: 4.6E-115
score: 384.4
IPR001627Sema domainPROSITEPS51004SEMAcoord: 367..850
score: 104.395
IPR001627Sema domainSUPERFAMILY101912Sema domaincoord: 386..854
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 900..989
e-value: 1.4E-7
score: 30.7
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 391..851
e-value: 6.4E-140
score: 466.2
IPR008979Galactose-binding domain-likeGENE3D2.60.120.260coord: 92..159
e-value: 5.9E-4
score: 19.3
IPR000034Laminin B type IVPFAMPF00052Laminin_Bcoord: 1262..1396
e-value: 1.1E-25
score: 89.7
IPR000034Laminin B type IVPROSITEPS51115LAMININ_IVAcoord: 1221..1397
score: 28.03
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 889..990
score: 8.956
IPR016201Plexin-like foldSUPERFAMILY103575Plexin repeatcoord: 855..882

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000006340 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000006340EMLSAT00000006340-702187Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000006340 ID=EMLSAP00000006340|Name=EMLSAP00000006340|organism=Lepeophtheirus salmonis|type=polypeptide|length=2344bp
MRLKALWISPLFLSCIIVDYVKTDGTGSPCYEDGDFSKPQKCMPAFKNVV
LQKKVHVSPEYITCGQGRVIEYCIQTHGIDRECNFCDNSVPSNKHPPQFL
TDVDTDFNRTWWQSVTMLEDVHMAXVNLTVNLGKAYDITYVRLKFKSLRP
DSFSIYKKNRVQPKLEDPEPNEGWIPWQYYSNTCRDTYKLTDSTSIIQPR
DGVMKINEDRALCTSEFSDMTPLTGGNVAFSTLEGRPSAYNYEYSPELQD
WVSATDIKISFQRLNTFGDEVFQDPKVLRSYYYAVTDFTVGGRCQCNGHA
THCINTIEDDPQSPTVCLCQHQTEGPNCDSCLPDHWDRPWRRATSDNANE
CKPLSLINYLFVIVDRGVWLKLKKRGGLGSPYVEELRCLENDGYYRTLTL
DEKRGVLYVGGMDVLIRGNANNISLTSCSTDILRMDPDKVDSCVGRGKSS
EFQCRNHIRVIEVIDDDRIYVCGSNAHHPLDEVLYANLTRLGRHEFYPGI
GDGIAKCPYDPDDNSTAIWVTSGNPGELPAIYSATNAEFTKADTVIFRGD
IFDPVSNRREYTYKRTIKYDSYMLDKPDFVAXFEVGEYVFFFFREIAIEY
INCGKVIYSRVARVCKSDVGGKNILHLNWVTYLKARLNCSIPGEFPFFFN
EIQHVFKSEDDNTFHAVFTTSNNGLRGSAICSFRLEDVEKVFQGKFKEQA
TSTSVWLPVGKSSVPQPRPGTCVKDTRNLPDSVLNFIRKHPLMDADVPHD
SRAPIFYRKDIFFTRIAVDKVHAGRYGQEKEYTIFYAGTDNGKIYKVSRW
KDSKGEYQSRLLDILSVFEDGEAVRAMTIATKQRKSLFVSSDKTIKQVDL
HLCSSRYDSCVKCLRDPYCGWDREAGKCRPYHLGLLQDPSEAEHGLCKAS
TPTQKLIANFGQSVHLPCQLRQDNEGEGVSWYRFDNRRGKRYPVHQSFDK
YVITNDNGLVIIGINENDAGKYDCVLNEKDIVNSYHIAVDSHRCSAPNKT
ADYQKIYSDWCHEFQRYKSALKTWELKQAQCGTCECNGWSMRCRFNEQLY
MESGHGGEXMDCEGNRGGAHCEVCKSNHYFSPVPDADDRIPCEPCNCDPT
GSKTLQCADNGICDCKPGVTGEKCNQCKADFWNFGTLGCKECGCLPEGCI
GNKASCDTKTGYCHCKQNVEGQRCDRCMAGHFHIDPENEFGCTPCFCYGH
TSECELSGGYTKFSILSDFSRSSEDWTSFEQDESLPLRYDGINKLIGVQS
LPIQGSQSGGAYFYAPPAFLGDLRASYNQELSFRLRINNAGPRPDRYDII
IQGGGVKETMISLPITKQNNPMPNYEMQDYKFRLHENPEFGWSPTLSSKD
FMSILANVSAXKVRGTYVTQGMGFLDEVKLGTARRGVTGPQATWIERCNC
PEGYQGQYCQFCMPGYHHKNNGGPFARCIPCSCNGHADICDTESGKCECK
DKTDGQNCEKCARGYYGNALNGSPNDCQACPCPKGGACLEIAGNPESPIC
IECPDGRTGPRCELCKDGYFGDPMGQNGEVRPCQRCECNDNVDPNAIGNC
DRVTGECLRCIDNTDGFNCQQCKSGFFGDALAIKKPGDPPNCQHCQCYPV
GTNLDTETFLPICNGFTGDCSCKPHVVGRDCEKCANGYFNIDSGEGCEPC
NCDSTGSKNESCHVETGQCNCNEGVTGQRCDTCMAFHYGFSQDGCKPCDC
DPSGSTDLQCDFVTGQCPCREKVEGRKCDRCMENTKSQQIGPYGGEKICE
PCDDCYNLVLDSANRHRNNLETLENLLQQIAENPEPVGDDFEYQLRGLRV
RVAXTLVDARISSQNEEGNTLRGRLEELRLKLEEVISQVMEANRQIETAK
QHGVEADDKVRNAKEVIERAKESLKVSQRQLETQGRDALMKAQEKSKKFG
RESDKMSAIAREAGNLAEKLVEDASEITSIARQASNTSSKAYEMTREALE
EQHIEANQIDILNHQVDEMGEKLRSVQSLANVALREANEAYQQALIILRQ
AKGLEIPQVNSEEVSEKASQVEVDAERIRGEAERLIQDNMELLQQTQDKR
AMLEELLNRANVQQQEVDRQLADMDEFRNRAINAVKSGNDILKDAQATLE
TLQAFGGHVDENRDSAKEAMKNVDYIENIIRDSEGKTNEARESLSGADTY
ANLSLSVAKHAKDIAEEASVNADKIVNESAVTWEQAKELSSSVASLEDKX
EETKXIIEEKELVAEQDGQLAKTALAKANEAQIKARDAVEKVNNAKKELD
NIAVILANVQEPEPGLIERLEVRVQMAEEKYKAADLELRLKELEEAKQRQ
AIQVRDLERELNYMLEESRNIQEIRDTLPDFCPKNDDLCIEDQC
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