|
Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001650 | Helicase, C-terminal | SMART | SM00490 | HELICc | coord: 281..362 e-value: 8.7E-36 score: 134.9 |
IPR001650 | Helicase, C-terminal | PFAM | PF00271 | Helicase_C | coord: 286..362 e-value: 2.1E-28 score: 97.9 |
IPR001650 | Helicase, C-terminal | PROSITE | PS51194 | HELICASE_CTER | coord: 257..401 score: 27.14 |
IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | SMART | SM00487 | DEXDc | coord: 47..244 e-value: 1.1E-57 score: 207.6 |
IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | PROSITE | PS51192 | HELICASE_ATP_BIND_1 | coord: 59..229 score: 28.761 |
IPR011545 | DNA/RNA helicase, DEAD/DEAH box type, N-terminal | PFAM | PF00270 | DEAD | coord: 53..215 e-value: 2.4E-41 score: 140.9 |
None | No IPR available | GENE3D | 3.40.50.300 | | coord: 15..242 e-value: 2.7E-73 score: 245.4 |
None | No IPR available | GENE3D | 3.40.50.300 | | coord: 243..399 e-value: 1.5E-58 score: 196.2 |
None | No IPR available | PANTHER | PTHR24031 | FAMILY NOT NAMED | coord: 3..401 |
IPR000629 | RNA helicase, ATP-dependent, DEAD-box, conserved site | PROSITE | PS00039 | DEAD_ATP_HELICASE | coord: 175..183 |
IPR014014 | RNA helicase, DEAD-box type, Q motif | PROSITE | PS51195 | Q_MOTIF | coord: 28..56 score: 10.497 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 96..384 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000007141 ID=EMLSAP00000007141|Name=EMLSAP00000007141|organism=Lepeophtheirus salmonis|type=polypeptide|length=401bp MTEKVIRKVEEDLANVEFETSEDVEVIPTFDSMGLREDLLRGIYAYGFEK PSAIQQRSIKPILKGRDVIAQAQSGTGKTATFSISILQSIDTTMRETQCL VLSPTRELAVQIQKVLLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVV SGTPGRVYDMIRRRTLRTRGIKMLVLDEADEMLNKGFKEQIYDVYRYLPP FTQIALISATLPHEILEMTSKFMADPIRILVKRDELTLEGXKQFFVAVER EEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGD MPQKERDAIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNREL YIHRIGRSGRFGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADL I back to top
|