EMLSAP00000007361, EMLSAP00000007361 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000007361
Unique NameEMLSAP00000007361
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length545
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000003Retinoid X receptor/HNF4PRINTSPR00545RETINOIDXRcoord: 219..232
score: 46.46
coord: 379..397
score: 38.78
coord: 420..439
score: 24.16
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 151..167
score: 56.45
coord: 208..216
score: 46.85
coord: 200..208
score: 61.06
coord: 167..182
score: 59.21
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399ZnF_C4coord: 148..219
e-value: 6.7E-34
score: 128.6
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 150..218
e-value: 1.2E-27
score: 95.8
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 151..177
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 148..223
score: 20.444
IPR001723Steroid hormone receptorPRINTSPR00398STRDHORMONERcoord: 391..406
score: 40.5
coord: 296..317
score: 35.31
coord: 448..465
score: 23.9
coord: 212..222
score: 40.89
coord: 317..333
score: 43.22
IPR000536Nuclear hormone receptor, ligand-binding, coreSMARTSM00430HOLIcoord: 295..460
e-value: 1.2E-40
score: 151.0
IPR000536Nuclear hormone receptor, ligand-binding, corePFAMPF00104Hormone_recepcoord: 290..472
e-value: 2.7E-28
score: 98.3
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 214..486
e-value: 3.5E-58
score: 196.6
IPR008946Nuclear hormone receptor, ligand-bindingSUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 218..254
coord: 289..485
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 149..213
e-value: 9.0E-29
score: 99.1
NoneNo IPR availablePANTHERPTHR24083NUCLEAR HORMONE RECEPTORcoord: 148..489
NoneNo IPR availablePANTHERPTHR24083:SF41HEPATOCYTE NUCLEAR FACTOR 4-ALPHAcoord: 148..489
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 149..233

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000007361 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000007361EMLSAT00000007361-703208Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000007361 ID=EMLSAP00000007361|Name=EMLSAP00000007361|organism=Lepeophtheirus salmonis|type=polypeptide|length=545bp
MSXSLYHHIHSQHHLYXHISVXPAMRSSPSSSSSLSSNNTLLKTEXPDIP
EXXHEMQPPPISTHSGAHLLVHDHNHQHSHHSQATQQQLPNIIPLVDSSH
LESLPTIIQENNTSLESALEDSKSEFVLGGNEDEVIGVLPPPLAPNNIQN
CAVCGDRATGKHYGAASCDGCKGFFRRSVRKERVYGCRQNRACIVNKDKR
NNCRYCRLKMCIKAGMKKSAVQNERDRISCRKKTSAKDMNSANELTVTAL
LNADKVGQKSLLNSIVGGNINTNNFITEENVLANKQLASIEDIGHSMKEQ
LIVLVEWAKHIKAFCELSVDDQVRLLRAHSGEHLLMGVAKRSMNLNGILL
LGNDMIIVKDERKWNSESQDAAVRSIGVRVMNELVDTFKRINIDDAELAC
LKAIVFFDPHVRGLHDVEQIKKLRSQIHTNLEDYINDRLYESRGRFGEIL
LSIQSLQAITWQMIEQISFAKNFGVGVDSLLQEMLLGGSVYPTQQQLPID
NEPHQQVLTGNSSMIIPXXXSLVDHHSLQSHNYINDQSCMTLLNN
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