|
|
Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 154..175 |
| None | No IPR available | GENE3D | 2.60.40.150 | | coord: 1095..1195
e-value: 8.1E-8
score: 31.6 |
| None | No IPR available | GENE3D | 2.60.40.150 | | coord: 1706..1901
e-value: 5.3E-21
score: 74.2
coord: 1467..1584
e-value: 8.9E-36
score: 122.1
coord: 453..616
e-value: 1.9E-21
score: 75.6
coord: 1676..1700
e-value: 8.9E-36
score: 122.1 |
| None | No IPR available | GENE3D | 2.60.40.150 | | coord: 919..1053
e-value: 1.3E-20
score: 73.1
coord: 267..418
e-value: 4.3E-18
score: 64.8 |
| None | No IPR available | PANTHER | PTHR12546:SF14 | FER-1-LIKE 2,4 | coord: 4..1985 |
| None | No IPR available | PANTHER | PTHR12546 | FER-1-LIKE | coord: 4..1985 |
| None | No IPR available | TMHMM | TMhelix | | coord: 1952..1974 |
| IPR000008 | C2 domain | SMART | SM00239 | C2 | coord: 300..397
e-value: 1.6E-10
score: 50.9
coord: 1102..1201
e-value: 27.0
score: 4.1
coord: 1481..1580
e-value: 4.4E-12
score: 56.1
coord: 1722..1851
e-value: 0.21
score: 20.7
coord: 461..572
e-value: 3.5E-13
score: 59.8
coord: 922..1030
e-value: 1.4E-4
score: 31.2 |
| IPR000008 | C2 domain | PFAM | PF00168 | C2 | coord: 464..555
e-value: 4.1E-15
score: 55.2
coord: 301..379
e-value: 7.9E-9
score: 35.1
coord: 1120..1183
e-value: 2.8
score: 7.7
coord: 923..1011
e-value: 6.0E-11
score: 41.9
coord: 1803..1835
e-value: 0.025
score: 14.3
coord: 1483..1564
e-value: 7.2E-18
score: 64.1 |
| IPR000008 | C2 domain | PROSITE | PS50004 | C2 | coord: 464..557
score: 12.366 |
| IPR000008 | C2 domain | PROSITE | PS50004 | C2 | coord: 922..1013
score: 14.216 |
| IPR000008 | C2 domain | PROSITE | PS50004 | C2 | coord: 1482..1565
score: 14.482 |
| IPR000008 | C2 domain | PROSITE | PS50004 | C2 | coord: 300..382
score: 9.332 |
| IPR000008 | C2 domain | SUPERFAMILY | 49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | coord: 921..1053 |
| IPR000008 | C2 domain | SUPERFAMILY | 49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | coord: 1089..1189 |
| IPR000008 | C2 domain | SUPERFAMILY | 49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | coord: 1465..1597 |
| IPR000008 | C2 domain | SUPERFAMILY | 49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | coord: 22..120 |
| IPR000008 | C2 domain | SUPERFAMILY | 49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | coord: 1690..1858 |
| IPR000008 | C2 domain | SUPERFAMILY | 49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | coord: 300..434 |
| IPR000008 | C2 domain | SUPERFAMILY | 49562 | C2 domain (Calcium/lipid-binding domain, CaLB) | coord: 459..568 |
| IPR012968 | FerIin domain | PFAM | PF08151 | FerI | coord: 383..453
e-value: 3.6E-24
score: 84.4 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000007482 ID=EMLSAP00000007482|Name=EMLSAP00000007482|organism=Lepeophtheirus salmonis|type=polypeptide|length=1985bp
MSLVVKLIGFNGSGTGGDRIAKATFRGVSHISKTFEDRDDWIDIDEQLDW
PIASPLQRDENISIHIMAFNRFLNNRLLGNTTFSLHRLLDQPTVQLAASL
LDMNGIPLKASIKLEMSYYSPFSYEDDSVDELEAEDDDNIRSYISDDLSD
NKALVSIERNIANIERNFNRRQDEVRLSRSSSLDHGSFXEQKRKKPFSII
KKRSNPLKTVRNVIRTMGVVKGSHGDEESLMNRDSDSVGVPSDIEASFSE
EAPLLEKPSFSNEIIQKTNKNESVKQRSQSKRNKQSSNAVSTSLRAQDFQ
LCITVIEARQLAGLNMDPVVCVQVGDQKKYTSVKESTNCPYYNEYFVFDF
HMAPVMLYDKIITLSVLQRHFLRTGKILGSFKLDVATVMSQEDHQFYHKW
ALLTDPDDITGGPKGYLKCDINVITKGDAVKIPPKSERDEDDIEANLLLP
DGVPAERQRAKYIVRIYRADGLPRMNSSIMANLKHAFGGPPKDLVDPYVQ
VSFAGLCGRTSVKKNSYSPVWNEQIVFTEMFPPLCQRIKIQLRESDTVGD
TVIGTHFLDLSTISHDGDKGFLPTFGPAFVHLYGSTRDYSIIDEHSTLND
GLGEGVSYRGKILIALKADISDTIDTAPSEVEVEPTQTINESSYGKLDEF
FLFGCIMEATMIDKKLADKPIQFEISMGNAGNSIDGHIKSSKSRSDIDSD
SISLHEETAGSMESLNVSWQSTTPSLKPQTHDRLYYYLPYWDDKPTTYIR
SVFPDHRKRMYNSNAISKIADKLEENLREVHNMIEMEDPCTEEKLKKILE
QLQQVMKLKSCSTQESIGTLARQYKIVKKSTIKEKYKMTYGLLDRLRQLI
DDLPGRKGTGSGGWMIQAKLQIYLWLGSTKHKKAFPSGIPSGFQITNELL
NAEKLGLSPPLSIHYTEKYCFQLRAHMYQARSLIGSDASGLSDPFARVII
GEYCRTTQVIDETLSPTWDELLIFDQIVVYGRREDIKLNPPTIIIEIYDQ
DKVGKAEFLGRSVGKPWVCLIGSSDYQTPSLEWFQIYRGNEEAGELLAAF
EMFELAEVAGHDPYSNLSEPKDNGPYIDSGPVLPVPKGIRPTLAKYRFEV
LFWGLRDVKRVHWLTVDKPRVDIECAGNIIQSSVITNAKKNPNFSTTVKF
LDIELPEQEIYCPPLTIRVVDCRSFGRYTLVGTHVINSIHKFLYHPVTRK
SRDDADKRKKESLLRSQYQDLSSSLLPSNPNSVSSLELTPLVPKAKDSLI
TLDYGTYAIPNGCGLDISSSTDNNKNKGSHGFNNQSGHQTDDLIDDDEES
LDWWSKYFASVDAMIEEGRVKRGGDQEKGEEPHQNSTKDSNLYGLLEEEP
KKRKYGGIMNVTNVAKSAANKFSPNRASQIQQQRKKSKSSIALFKLFPNE
LESQVGLDGFTEWLXTFXLYRGKKSEEEFEDETRIVGKFKGSIKIYKLPL
LKDLDDHTVMGFDPQFGFFQGLPSNDPLHVLVRVYVVKANDLHPMDINGK
ADPYLVLQLGSKRTSDKENYISKQLNPIFGKCFEFEATFPQDSVLTVQVY
DWDLLGSDDLIGETKIDLENRFFSRHRATCGLTSRYDTCGXXQWRDPMKP
VQLLTKLCKEGKVDGPHFSNMKVRVGQKTFTLQSKEGGPLQNWQTKVSEE
HLALAVLHHWNEIPRVGTYLVPEHIETRALFNPDKPGIEQGKLEIWVDMF
PMDMPLPGLPVDISPRKPSSYELRVIIWNTDEVVLEDDAFFSGDKMSDIY
VKGWLKGPDDAQQTDVHYRSLTGEGNFNWRFLFPFEYLAAEEKVVISKKE
SMFSWDETTSKVPARLTLQVWDADHFSKDDFLGAITMDLNRFPRGAKTAK
KCTSDMLKTDGTVPTINLFKQKRTKGWWPLYIKTENEGLLLQGKVEAELS
LHTAEEAEKMPAGLGRDDPNGLEKPTRPDSSFMWFVNPIKSIRYIIWHNY
KWTIVKLICWIGLLLFLILFFYALPGYSIKKMLGA back to top
|
