|
Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PRINTS | PR00237 | GPCRRHODOPSN | coord: 215..238 score: 24.83 coord: 359..385 score: 32.79 coord: 84..105 score: 32.41 coord: 51..75 score: 24.54 coord: 131..153 score: 23.01 coord: 167..188 score: 21.34 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PFAM | PF00001 | 7tm_1 | coord: 66..377 e-value: 3.2E-45 score: 154.1 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PROSITE | PS00237 | G_PROTEIN_RECEP_F1_1 | coord: 137..153 |
None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 334..393 e-value: 4.9E-69 score: 232.0 coord: 47..277 e-value: 4.9E-69 score: 232.0 |
None | No IPR available | PANTHER | PTHR24249:SF52 | MUSCARINIC ACETYLCHOLINE RECEPTOR-RELATED | coord: 20..400 |
None | No IPR available | PANTHER | PTHR24249 | HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR | coord: 20..400 |
None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 334..394 coord: 33..257 |
None | No IPR available | TMHMM | TMhelix | | coord: 86..108 |
None | No IPR available | TMHMM | TMhelix | | coord: 52..74 |
None | No IPR available | TMHMM | TMhelix | | coord: 216..238 |
None | No IPR available | TMHMM | TMhelix | | coord: 168..190 |
None | No IPR available | TMHMM | TMhelix | | coord: 128..147 |
IPR017452 | GPCR, rhodopsin-like, 7TM | PROSITE | PS50262 | G_PROTEIN_RECEP_F1_2 | coord: 66..349 score: 27.613 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000007798 ID=EMLSAP00000007798|Name=EMLSAP00000007798|organism=Lepeophtheirus salmonis|type=polypeptide|length=400bp MEKYHNNISLAIKSALKFNKQECINNNDKDLDMSCDFKCWPAPFGIIGTV CTAIILSLITIITIGGNFLVLIAFGVKQKLRESKNFFIVSLAFTDLLIGM ISLPLFSVYILVGFWPPQLGPILCDLWLSIDHTVCLVSQLTVLSITIDRF CSVRFPAHYQIIKDRNKTILIIIGTWAISALIFFIPIFGWEHFIDKRDLL PGECKVQFLKDPLFNTSLIICYFWIPLIILIYLYGSIYRTAWTLSKKSMN KRESRLNLLNKMNQAKEESRKGHQIPRQLIQMRPRETDNNNYVIDEEHSI QSKDNDIKVASKPKNQLRNWFHRQRNDKEYQEGKAKKALRTISMILGAFY PASVNGKIYMISYFLCYANSSINPLCYAASNRQFRKTFKRVILHGDLSRK back to top
|