EMLSAP00000007894, EMLSAP00000007894 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000007894
Unique NameEMLSAP00000007894
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length428
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001723Steroid hormone receptorPRINTSPR00398STRDHORMONERcoord: 97..107
score: 45.7
coord: 385..402
score: 41.14
coord: 268..284
score: 40.97
coord: 325..340
score: 42.0
coord: 247..268
score: 31.35
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 34..50
score: 48.57
coord: 93..101
score: 50.91
coord: 50..65
score: 52.99
coord: 85..93
score: 60.8
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399ZnF_C4coord: 31..104
e-value: 6.8E-35
score: 131.9
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 33..103
e-value: 5.7E-28
score: 96.8
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 34..60
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 31..108
score: 19.645
IPR000536Nuclear hormone receptor, ligand-binding, coreSMARTSM00430HOLIcoord: 246..397
e-value: 2.2E-24
score: 97.0
IPR000536Nuclear hormone receptor, ligand-binding, corePFAMPF00104Hormone_recepcoord: 231..409
e-value: 6.1E-25
score: 87.4
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 32..97
e-value: 2.9E-32
score: 110.3
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 201..202
e-value: 3.5E-70
score: 235.9
coord: 98..145
e-value: 3.5E-70
score: 235.9
coord: 235..425
e-value: 3.5E-70
score: 235.9
IPR008946Nuclear hormone receptor, ligand-bindingSUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 166..171
coord: 199..425
coord: 102..116
NoneNo IPR availablePANTHERPTHR24083:SF60SUBFAMILY NOT NAMEDcoord: 25..428
NoneNo IPR availablePANTHERPTHR24083NUCLEAR HORMONE RECEPTORcoord: 25..428
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 30..117

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000007894 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000007894EMLSAT00000007894-703741Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000007894 ID=EMLSAP00000007894|Name=EMLSAP00000007894|organism=Lepeophtheirus salmonis|type=polypeptide|length=428bp
MLFQPQLHSPPHSSPEFGAKSQQTSSRILYDIPCKVCTDHSSGKHYGIFA
CDGCAGFFKRSIRRNRLYVCKAKSEGSCLVDKTHRNQCRACRLKRCVDVG
MNKDAVQHERGPRNSTLRRQMSLYFKEHSNNNTTTVSSESGSPRSSPPIN
STLPQFQGIGGASVSSSSSPPLLFTSPHATXPGLDLSPXSKPLIXFPLPL
SXPPLHHPLPPPPMPALPLPFNFFPSPYAPPTFHTSGLRNPENVSETAAR
LLFMNVRWAQNVPAFTSLPYRDQLLLLEESWRELFLLSSAQFNLPVELVA
SQDKSISVLSELKNFQEAIAKFQSMQVDTTEFACLRAIILFKTVLEEEKE
LRDTSSITSLQDQAQLTLSKYISXAYPGQPMRFGKLLLLLPSLRSVSGNV
IEELFFKKTIGPIPIERIICDMXKAGXI
back to top
Add to Basket