EMLSAP00000008261, EMLSAP00000008261 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000008261
Unique NameEMLSAP00000008261
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length476
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 135..156
NoneNo IPR availablePANTHERPTHR24082NUCLEAR HORMONE RECEPTORcoord: 9..465
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 62..148
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 80..95
score: 44.3
coord: 113..121
score: 55.91
coord: 63..79
score: 23.16
coord: 121..129
score: 57.25
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399ZnF_C4coord: 60..132
e-value: 8.4E-27
score: 105.0
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 62..130
e-value: 3.0E-21
score: 75.3
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 63..90
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 60..136
score: 18.249
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 274..472
e-value: 5.6E-20
score: 71.4
coord: 118..175
e-value: 5.6E-20
score: 71.4
IPR008946Nuclear hormone receptor, ligand-bindingSUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 274..471
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 63..117
e-value: 3.6E-20
score: 71.9

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000008261 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000008261EMLSAT00000008261-704108Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000008261 ID=EMLSAP00000008261|Name=EMLSAP00000008261|organism=Lepeophtheirus salmonis|type=polypeptide|length=476bp
MNMSRVLENIHFNYSTEDMIKGPINSSSSSSPECLQSNMFFTSETMRTRT
YKKRAKFIRKVTCHICSDTANDHIHYGAIACXSCRAFFRRAVICNAEYHC
SRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWVMSESEKREKKEKIRLK
KLKAQQLLDPENGVKKSSFTPEWDKMLFQNNSNMHNMGNSTYDMSFSIFS
KKNTLNTFSEEYRNCYGHYRTSHIIQDCFDSGMSFNKMEIHLVQEMLYWE
IESRKKIPLNSVNMKSFMEYSQLNEPIPFEISLSGYNTCVQRITMFMTKI
NFFAALSPEDQKKLLLNNVDMVVNIKTARYLHPNNNITEQFEIINGKNNS
EKSCTTSPATSNNVYYQEIFKNPWCSSFEDKTQYKALMKAIFDLEMDEIT
IILLIGLTIFSTTNCVDLDNINLIMRFQDVFSHLLYKYLCSTIGNSSTFL
LFPKYINILAQLEEMAKTILNKRLPF
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