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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001650 | Helicase, C-terminal | SMART | SM00490 | HELICc | coord: 605..688 e-value: 4.6E-27 score: 105.9 |
IPR001650 | Helicase, C-terminal | PFAM | PF00271 | Helicase_C | coord: 610..688 e-value: 9.3E-17 score: 60.5 |
IPR001650 | Helicase, C-terminal | PROSITE | PS51194 | HELICASE_CTER | coord: 578..729 score: 20.059 |
IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | SMART | SM00487 | DEXDc | coord: 186..384 e-value: 2.3E-36 score: 136.8 |
IPR014001 | Helicase, superfamily 1/2, ATP-binding domain | PROSITE | PS51192 | HELICASE_ATP_BIND_1 | coord: 202..374 score: 23.122 |
None | No IPR available | GENE3D | 3.40.50.300 | | coord: 190..371 e-value: 6.0E-30 score: 103.4 |
None | No IPR available | GENE3D | 3.40.50.300 | | coord: 570..725 e-value: 2.9E-29 score: 101.2 |
None | No IPR available | PANTHER | PTHR10799 | SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED | coord: 41..751 |
IPR000330 | SNF2-related | PFAM | PF00176 | SNF2_N | coord: 193..479 e-value: 7.3E-69 score: 231.7 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 175..423 |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 518..736 coord: 425..465 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000008498 ID=EMLSAP00000008498|Name=EMLSAP00000008498|organism=Lepeophtheirus salmonis|type=polypeptide|length=817bp MGLRSRSKRLRLDVKEDLKVDASSSVPSEDDSPPQKTRAHIRPLKPRRKV ERDNGEESEDETLPKLDVDDDWIQIEEEAKTQNEKRFKKETEGMISGQNI SEEERFDKLMDLLGKSKFYADHLKNKLREDNSKKLKEEMLKNRKSTVLQS LNNSKKRKFVDEDTAPKKHRLFEGKEIPDDQPLLVKGGIMRDYQIKGFQW MCSLWENGINGILADEMGLGKTIQTISLFAHLIEMGVEGPFLVVAPLSTL GNWVNEFKRFTPDIPVVLFHGNLEKRKELFRRLKDVAHVTGIRGGIKSVF VTSYEIILNSRKLFKNMNWKYIVVDEGHRLKNFKCRLIKELKMYHTANKL LLTGTPLQNNMAELWSLLNFLMPEIFNDLNMFQSWFSVEKIQANENDSIS MSERETKVLTTLHQILSPFLLRRIKSDIELKIPPKKEVLVYCPMTAYQTN LYKATINKTLKTLLEDSETSDSSSKEDLIRSNRRPKKMYYSELNDASIDD TINRRNEAMVWKNGVDVSTGCQRNAPRNSVLNFSNKNITMDLRKITNHPY LIEYPLSEDGNFYRSDKDMIDACGKLKVLDQLLNELIVKRNHKVLIFSQM TKMLDILEDYLQLQGFSHVRLDGSMKLEERQENIHNFSSSSDLNIFLLST RAGGLGINLTAADTVIIYDSDWNPQQDLQAQDRCHRIGQTRPVMIYRLVT ANTIDERIVQIASSKRRLEKMVIHEKEFKSVEYDTNLFNLTRKDLLGLLR HCDHSGIVDRKDGAIFTPEELGVLMNRSNMYSTSTTSSLKNGHAFKLVDS STSETLLSSICSKENSQ back to top
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