EMLSAP00000008518, EMLSAP00000008518 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000008518
Unique NameEMLSAP00000008518
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length590
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01705TSP1REPEATcoord: 369..382
score: 47.96
coord: 406..417
score: 36.24
coord: 387..398
score: 44.57
NoneNo IPR availableGENE3D2.20.100.10coord: 250..304
e-value: 8.1E-17
score: 60.7
coord: 428..469
e-value: 1.3E-10
score: 40.9
coord: 309..353
e-value: 4.7E-7
score: 29.5
coord: 368..419
e-value: 3.5E-16
score: 58.7
coord: 193..247
e-value: 4.0E-16
score: 58.5
coord: 471..525
e-value: 2.0E-16
score: 59.4
NoneNo IPR availableGENE3D2.170.300.10coord: 31..97
e-value: 2.0E-4
score: 20.7
NoneNo IPR availablePANTHERPTHR19897COILED-COIL DOMAIN-CONTAINING PROTEINcoord: 190..525
NoneNo IPR availablePANTHERPTHR19897:SF72HEMICENTIN-1coord: 190..525
IPR000742Epidermal growth factor-like domainSMARTSM00181EGFcoord: 65..96
e-value: 0.5
score: 19.4
coord: 35..64
e-value: 0.65
score: 19.0
coord: 126..157
e-value: 23.0
score: 11.8
coord: 98..125
e-value: 130.0
score: 3.2
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 129..157
score: 6.872
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 91..125
score: 7.886
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 32..64
score: 10.814
IPR000884Thrombospondin, type 1 repeatSMARTSM00209TSP1coord: 429..469
e-value: 2.7E-4
score: 30.3
coord: 253..305
e-value: 1.7E-12
score: 57.5
coord: 371..423
e-value: 7.4E-14
score: 62.0
coord: 310..358
e-value: 6.7E-5
score: 32.3
coord: 474..526
e-value: 3.4E-12
score: 56.5
coord: 196..248
e-value: 4.9E-9
score: 46.0
IPR000884Thrombospondin, type 1 repeatPFAMPF00090TSP_1coord: 372..422
e-value: 4.7E-11
score: 42.5
coord: 197..247
e-value: 8.7E-10
score: 38.4
coord: 254..304
e-value: 3.0E-8
score: 33.5
coord: 431..465
e-value: 2.7E-8
score: 33.6
coord: 477..520
e-value: 7.2E-9
score: 35.5
coord: 313..353
e-value: 1.3E-5
score: 25.0
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 426..467
score: 9.394
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 250..305
score: 12.165
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 368..423
score: 12.097
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 193..248
score: 12.64
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 471..526
score: 12.702
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 307..358
score: 9.518
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 428..467
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 192..243
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 310..353
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 368..417
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 471..520
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 247..304
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 84..95
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 145..156
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 52..66
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 113..124
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 52..63
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 113..127
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 145..156
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 84..95

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000008518 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000008518EMLSAT00000008518-704365Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000008518 ID=EMLSAP00000008518|Name=EMLSAP00000008518|organism=Lepeophtheirus salmonis|type=polypeptide|length=590bp
ETSTYNRLLPSYTFACHSENLKGWSHAEFLCKIPICSQGCGGNGRCVTPN
TCKCDSGWRGDTCNECIPSSQCQNGFCVHSPKECICSLGWAGVNCDLQDH
GCVHGTFSSKHHCTCDPGWLGRNCSSCIPHPSCVWGSCKSTPGECFCDPG
WDGRNCDIPICEKGICRDTVSEESCSGNSVETKDCHLAYCKINGHWSLWT
SWSICSASCGEGLVKRIRLCDNPHPRYGGSSCAGRNEELMSCFYRECPKD
GEWSLWEDWSHCSRPCGIGFKNRQRYCDSPTPDHSGKYCFGLNYESNTCN
LFDCNSTVKWLXWXEWXSCSLSCGNGVRTRIRRCSSVNVTTCLTQEKIEH
ESCFNFCSLSSSPSGQIQGHWSTWEHWSQCSTSCGVGISIRERLCNNPIP
SEMGKPCSGLGYESRICFGALCSDNVEHWGLWALWSKCSLTCGRGKRTRT
RECLHPDGGIIPCKGIPKEKDGEWGFWKEWSDCSASCGEGTKTRIRKCDN
PKPDGNGRPCPGLSMQKGDCLNGXCNSVLEVIARAHRRRSSFVTLYLVLG
RNGSLGVCAQLVVATVSNIVIDDVKKTTVLDPISRIRSAT
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