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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 110..131 |
None | No IPR available | COILS | Coil | Coil | coord: 36..92 |
None | No IPR available | PANTHER | PTHR12587:SF1 | LIP-RELATED PROTEIN (LIPRIN) BETA | coord: 37..547 |
None | No IPR available | PANTHER | PTHR12587 | LAR INTERACTING PROTEIN (LIP)-RELATED PROTEIN | coord: 37..547 |
IPR001660 | Sterile alpha motif domain | SMART | SM00454 | SAM | coord: 331..397 e-value: 5.8E-8 score: 42.5 coord: 258..325 e-value: 2.0E-6 score: 37.4 coord: 423..495 e-value: 0.067 score: 22.3 |
IPR001660 | Sterile alpha motif domain | PROSITE | PS50105 | SAM_DOMAIN | coord: 261..325 score: 12.662 |
IPR001660 | Sterile alpha motif domain | PROSITE | PS50105 | SAM_DOMAIN | coord: 339..397 score: 13.018 |
IPR021129 | Sterile alpha motif, type 1 | PFAM | PF00536 | SAM_1 | coord: 336..395 e-value: 2.0E-11 score: 43.7 coord: 260..320 e-value: 9.3E-10 score: 38.4 |
IPR013761 | Sterile alpha motif/pointed domain | GENE3D | 1.10.150.50 | | coord: 255..321 e-value: 1.8E-7 score: 30.5 coord: 334..403 e-value: 7.0E-13 score: 47.8 |
IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 253..320 |
IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 420..466 |
IPR013761 | Sterile alpha motif/pointed domain | SUPERFAMILY | 47769 | SAM/Pointed domain | coord: 333..401 |
IPR011510 | Sterile alpha motif, type 2 | PFAM | PF07647 | SAM_2 | coord: 425..492 e-value: 2.5E-9 score: 36.7 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000008823 ID=EMLSAP00000008823|Name=EMLSAP00000008823|organism=Lepeophtheirus salmonis|type=polypeptide|length=556bp MTDEHSEASKLLEAALEQMDGIIQGAKFDFPTPTPEDRVEERLVSSESEK ESLRLEVSLLNTRIHKQNERIKELESLLRERDAEIEGKNSRSEGSNSYLT NQISELDRIKTEYQLNQLKLTSQIAQLKKENYDLRQKNLNPLHFNQKETN DGSKSNESSPDIPENVINNNHIVHRVISPQDDMDRSIQLPPKGIKKILGK MKRSNSGSHLEDSPNLNDTRQPFRRGGIRATVGGRLEGKIASTTLPSIAN QLLSRKPFMEWNVDTLCVWMETLGLSMYNNEIRKCIVDGKNFSSLNINEY EAKLGMKNPLHRKKVYLALSARVDVTKNDTQGQLDNQWVLRWLDDVGLPQ YKEIFLECKIDGRVLNMLTIDDLFYMKISNQLHHLSLKRGIQVLRLANFD PNCLARRSAFKGDKVIQDDPEAXSLWSNFRVMEWLKQVDLSEYSPNLRGS GIHGGIFIYESRFDDEVLASILSIPSSKTLLRRHLSIRFKELVGKEVMQE KRISKSEFQPLTPTTKAKFPSRVTAGQFSLKRKKSKSLFDYDDLLCPFTK SNNIKT back to top
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