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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PRINTS | PR00237 | GPCRRHODOPSN | coord: 335..361 score: 28.78 coord: 284..308 score: 20.86 coord: 34..58 score: 21.06 coord: 66..87 score: 23.98 coord: 112..134 score: 29.92 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PFAM | PF00001 | 7tm_1 | coord: 55..353 e-value: 1.5E-21 score: 76.6 |
None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 274..366 e-value: 5.5E-37 score: 126.6 coord: 8..241 e-value: 5.5E-37 score: 126.6 |
None | No IPR available | PANTHER | PTHR22751:SF8 | G PROTEIN-COUPLED RECEPTOR 142-RELATED | coord: 1..374 |
None | No IPR available | PANTHER | PTHR22751 | G-PROTEIN COUPLED RECEPTOR-RELATED | coord: 1..374 |
None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 21..240 coord: 272..373 |
None | No IPR available | TMHMM | TMhelix | | coord: 207..229 |
None | No IPR available | TMHMM | TMhelix | | coord: 36..58 |
None | No IPR available | TMHMM | TMhelix | | coord: 283..305 |
None | No IPR available | TMHMM | TMhelix | | coord: 154..176 |
None | No IPR available | TMHMM | TMhelix | | coord: 65..87 |
None | No IPR available | TMHMM | TMhelix | | coord: 335..357 |
None | No IPR available | TMHMM | TMhelix | | coord: 111..133 |
IPR017452 | GPCR, rhodopsin-like, 7TM | PROSITE | PS50262 | G_PROTEIN_RECEP_F1_2 | coord: 49..353 score: 25.708 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000009195 ID=EMLSAP00000009195|Name=EMLSAP00000009195|organism=Lepeophtheirus salmonis|type=polypeptide|length=379bp MESNITQGNDSSILECSQYSQWDESFLDIFSYWTEGVLQTFCAILGIIGN FLAGLILSRKSMKNVFNLLLVTLAIFDSTYLFGSILESFRKSFNLATNTH IILFPHMLYPITQISIAGSIFMTVAIALERYIAVHYPLTYNQAMHESNAL PKRIAKYISCVLFLSLLFSFTRFFEAEVRYDPENPLTPYLKPTVLRTNSM YVLYFNWSRLIVLGIIPFMLLVFFNVSIYKAIQARRKRRHKPDVTQMTTT MGEPKEHSASSKKIVNSVREQHVNETRSKKEDNLAVIFMAFILVFLICHL PRLLLNIHELLTITETMECQKRGHFSFSLMSMVSISVSHFLLVVNSSTNI IIYCALSSKFRVECNTVYTSLCRRLTGFY back to top
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