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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 680..701 |
| None | No IPR available | PANTHER | PTHR16199 | FAMILY NOT NAMED | coord: 136..1160 |
| IPR011989 | Armadillo-like helical | GENE3D | 1.25.10.10 | | coord: 405..510
e-value: 1.1E-8
score: 33.7
coord: 103..268
e-value: 2.4E-5
score: 22.7
coord: 352..381
e-value: 2.4E-5
score: 22.7 |
| IPR024741 | Condensin-2 complex subunit G2 | PFAM | PF12422 | Condensin2nSMC | coord: 233..389
e-value: 1.3E-26
score: 93.0 |
| IPR016024 | Armadillo-type fold | SUPERFAMILY | 48371 | ARM repeat | coord: 118..309
coord: 740..788
coord: 834..856
coord: 916..1095
coord: 359..547 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000009237 ID=EMLSAP00000009237|Name=EMLSAP00000009237|organism=Lepeophtheirus salmonis|type=polypeptide|length=1198bp
MNASSPSYYRVHLTFGPITWSPGYYHLFAFSHQSSIFMSSSRTSIRLKKK
KSGVPSLDLAGPIPAETIDDIVATSGNSVEEFIGTFHGLGTKHLESFFKN
LNKSQTLECWKNWSKLYTDQDPAIFSIFLNLIKSSLQDEKVVPPLHSIIK
TINPLLSSDKYSDTIRNNILSICDRQFKDFISDQVFVSHLIIYLLRKNLD
DNFSASTAKRIINVLTETRIMETLEPTLKPWILRTINEKSYYLNKEGIKC
LAFIVVKSKYNYGNQFHEMTKSILPGMKIENIYAIGELYKKIWLKYTSSQ
RENFQQNCIQDLMYHGVLANRNLPKDYEIFPQILRLLDPLHQDKNNKNIQ
AMLYNLWEPILWRNLKAPNHNVRCNAAEFLFSAFPCENPFLNLEERTLVH
DNQIKVMNDLLLDQEPSVRLIGVKGVCQVLSTYWAFLSSDSINELMMTLI
KKSSRDSDSVQIRVAVLNGLSDIIKDAPSSHVYLKNIIPKVGDSLRDVNE
HVRLSMLDLLSIVKSVKYIAYWEICSLDDLLYCLSRDNSPAVCRRLVKLI
FNSFFPMKEPESVKLERCVFLIEKNVSXANKFYKXSXKYMELVESVKFML
TILVSFKRHLSVAPNFNSHQNSIEDDSFSNKENVDEEQPSNLVNXEQDIS
NTFSRVEADSFLSDFIIMDNFLDIITVMWISRYEDLLKEENTEYRAVLEK
KTTKIMTNMFRVYKGTDMSRKIIYLCSLFSQKSVNTIVKYCLSSLKTCDF
QALIEGGTKLDTKSAISSWKGNFSSKEPQNFSIFIDALCNWKKGQDLMEL
ILYGIEKGFENINGLSLSLASSAKRRKSVRFIEKDDKIQLRSISFLTYVF
RHSINKQRVTSENMKELKEIYIELSKIKDFVKRGIEQNHFNEDAATEQYV
LYTWETYLKTMLMVEDDNSVISSFVFEWLNYLRLSTSSSNLRSYVLCTFL
LFLSNAFSLGKLNNSNEEVLTETVIFINHFNSPNAVEEDDSMEVSYLCLA
LLGEIQEWIFHQKSLTDINATLKSIQGCLVGILKNLKLGSDENHTITSDI
KQSLNSFVDSCKLYTSKPDSFFNLMKVFSQMIIEDMNAYLKKFEEEPLPN
FSKELPPLSLFLIQLLVPKYGKHLIEELRISLQLKSLSEKDILSAIWFIY
ILVIDVEFKISTTSLQNCFVQLKQLQVKDSRGLELMKSIQSHLDSQVD back to top
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