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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR002198 | Short-chain dehydrogenase/reductase SDR | PRINTS | PR00080 | SDRFAMILY | coord: 128..136
score: 52.41
coord: 149..168
score: 41.31
coord: 74..85
score: 43.47 |
| IPR002347 | Glucose/ribitol dehydrogenase | PRINTS | PR00081 | GDHRDH | coord: 170..187
score: 41.79
coord: 209..229
score: 33.04
coord: 8..25
score: 44.25
coord: 149..168
score: 39.67
coord: 74..85
score: 41.37
coord: 122..138
score: 34.01 |
| None | No IPR available | PFAM | PF13561 | adh_short_C2 | coord: 15..246
e-value: 5.1E-28
score: 98.3 |
| None | No IPR available | PANTHER | PTHR24321:SF0 | SUBFAMILY NOT NAMED | coord: 2..247 |
| None | No IPR available | PANTHER | PTHR24321 | FAMILY NOT NAMED | coord: 2..247 |
| None | No IPR available | SUPERFAMILY | 51735 | NAD(P)-binding Rossmann-fold domains | coord: 5..247 |
| IPR016040 | NAD(P)-binding domain | GENE3D | 3.40.50.720 | | coord: 2..246
e-value: 2.8E-78
score: 262.2 |
| IPR020904 | Short-chain dehydrogenase/reductase, conserved site | PROSITE | PS00061 | ADH_SHORT | coord: 136..164 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000009319 ID=EMLSAP00000009319|Name=EMLSAP00000009319|organism=Lepeophtheirus salmonis|type=polypeptide|length=247bp
MGRLDGKVALITAAAQGIGRETALLFAKEGAKVYATDINEALLKELSNHE
GISIFKLDVTNKEDVMNAKDSITESIDILFNCAGYVHHGSILDCDEDSWK
RSFEINVDSMYYMCKAIVPSMIENKKGGSIINMSSICSSIKGLPNRFAYG
TTKAAVIGFTKSLACDLVKHNIRVNCICPGTVDTPSLRGRVNNTPNPEKT
YTDFINRQPMQRLGTSTEIASFVLTLAEDNGAYCTGGDYKIDGGLSI back to top
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