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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PRINTS | PR00237 | GPCRRHODOPSN | coord: 29..53 score: 23.85 coord: 62..83 score: 36.08 coord: 107..129 score: 38.68 coord: 464..490 score: 38.22 coord: 196..219 score: 24.61 coord: 427..451 score: 32.98 coord: 143..164 score: 29.83 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PFAM | PF00001 | 7tm_1 | coord: 44..482 e-value: 6.5E-80 score: 267.8 |
IPR000276 | G protein-coupled receptor, rhodopsin-like | PROSITE | PS00237 | G_PROTEIN_RECEP_F1_1 | coord: 113..129 |
None | No IPR available | GENE3D | 1.20.1070.10 | | coord: 406..506 e-value: 9.9E-106 score: 352.7 coord: 15..232 e-value: 9.9E-106 score: 352.7 |
None | No IPR available | PANTHER | PTHR24247:SF26 | OCTOPAMINE RECEPTOR | coord: 24..553 |
None | No IPR available | PANTHER | PTHR24247 | 5-HYDROXYTRYPTAMINE RECEPTOR | coord: 24..553 |
None | No IPR available | SUPERFAMILY | 81321 | Family A G protein-coupled receptor-like | coord: 5..227 coord: 413..506 |
None | No IPR available | TMHMM | TMhelix | | coord: 430..452 |
None | No IPR available | TMHMM | TMhelix | | coord: 462..484 |
None | No IPR available | TMHMM | TMhelix | | coord: 144..166 |
None | No IPR available | TMHMM | TMhelix | | coord: 194..216 |
None | No IPR available | TMHMM | TMhelix | | coord: 64..86 |
None | No IPR available | TMHMM | TMhelix | | coord: 101..123 |
None | No IPR available | TMHMM | TMhelix | | coord: 30..52 |
IPR017452 | GPCR, rhodopsin-like, 7TM | PROSITE | PS50262 | G_PROTEIN_RECEP_F1_2 | coord: 44..482 score: 41.696 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000009433 ID=EMLSAP00000009433|Name=EMLSAP00000009433|organism=Lepeophtheirus salmonis|type=polypeptide|length=562bp MSNSTSSNVSAECFSPLDYIHLDDPRVIGSLVPLGILILLIIFGNMMVIA AVHMTQKLRGATNLFIVSLAWADLMLGIIVLPTSAMYEVFHIWIFGVHWC AIWLAVDVWMCTASILHLVVISLDRYIAVTHPVTYPNIMSSKRAKLLILG AWVLSFVICFPPLVGWNEDEDLFDENKSEDNSCMPECKLIQEPGYVIYSA VGSFYAPMLVMIFFNYKIYRTATKTTKAIRKGWTKIKVGQEEMGMGIHRG GGXPSSSNRLSAVSKRYSSSTPYINGIKRDRFDGILMEEETAKLLLAVSK NHGKDKLLSVQYTTTKRCAHGNHKTFVECGTQTGEEAPTAKPEEQKRKNS KVPRNCCFWRWKKSQLEASSKKNRQNSNTLLDWSDIDQDXPTTSNTPVNL KNIHCSTKLGKRNIKSQVKRFRMETKAAKTLGIIVGCFISCWFPFFTMYL ITSFCADCVPGIVFSVFFWLGYCNSAFNPVIYAMFSREFRGAFKKIICKL ICRDVGRNRGLAGMGFIPIAPRMAQFDMILADRALQDAENLNCPKSNNTN SNNNLNTNVTKK back to top
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