EMLSAP00000009433, EMLSAP00000009433 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000009433
Unique NameEMLSAP00000009433
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length562
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 29..53
score: 23.85
coord: 62..83
score: 36.08
coord: 107..129
score: 38.68
coord: 464..490
score: 38.22
coord: 196..219
score: 24.61
coord: 427..451
score: 32.98
coord: 143..164
score: 29.83
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 44..482
e-value: 6.5E-80
score: 267.8
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 113..129
NoneNo IPR availableGENE3D1.20.1070.10coord: 406..506
e-value: 9.9E-106
score: 352.7
coord: 15..232
e-value: 9.9E-106
score: 352.7
NoneNo IPR availablePANTHERPTHR24247:SF26OCTOPAMINE RECEPTORcoord: 24..553
NoneNo IPR availablePANTHERPTHR242475-HYDROXYTRYPTAMINE RECEPTORcoord: 24..553
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 5..227
coord: 413..506
NoneNo IPR availableTMHMMTMhelixcoord: 430..452
NoneNo IPR availableTMHMMTMhelixcoord: 462..484
NoneNo IPR availableTMHMMTMhelixcoord: 144..166
NoneNo IPR availableTMHMMTMhelixcoord: 194..216
NoneNo IPR availableTMHMMTMhelixcoord: 64..86
NoneNo IPR availableTMHMMTMhelixcoord: 101..123
NoneNo IPR availableTMHMMTMhelixcoord: 30..52
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 44..482
score: 41.696

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000009433 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000009433EMLSAT00000009433-705280Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000009433 ID=EMLSAP00000009433|Name=EMLSAP00000009433|organism=Lepeophtheirus salmonis|type=polypeptide|length=562bp
MSNSTSSNVSAECFSPLDYIHLDDPRVIGSLVPLGILILLIIFGNMMVIA
AVHMTQKLRGATNLFIVSLAWADLMLGIIVLPTSAMYEVFHIWIFGVHWC
AIWLAVDVWMCTASILHLVVISLDRYIAVTHPVTYPNIMSSKRAKLLILG
AWVLSFVICFPPLVGWNEDEDLFDENKSEDNSCMPECKLIQEPGYVIYSA
VGSFYAPMLVMIFFNYKIYRTATKTTKAIRKGWTKIKVGQEEMGMGIHRG
GGXPSSSNRLSAVSKRYSSSTPYINGIKRDRFDGILMEEETAKLLLAVSK
NHGKDKLLSVQYTTTKRCAHGNHKTFVECGTQTGEEAPTAKPEEQKRKNS
KVPRNCCFWRWKKSQLEASSKKNRQNSNTLLDWSDIDQDXPTTSNTPVNL
KNIHCSTKLGKRNIKSQVKRFRMETKAAKTLGIIVGCFISCWFPFFTMYL
ITSFCADCVPGIVFSVFFWLGYCNSAFNPVIYAMFSREFRGAFKKIICKL
ICRDVGRNRGLAGMGFIPIAPRMAQFDMILADRALQDAENLNCPKSNNTN
SNNNLNTNVTKK
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