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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001506 | Peptidase M12A, astacin | PRINTS | PR00480 | ASTACIN | coord: 166..183 score: 49.17 coord: 147..165 score: 48.07 coord: 270..283 score: 20.12 coord: 87..105 score: 39.3 |
IPR001506 | Peptidase M12A, astacin | PFAM | PF01400 | Astacin | coord: 219..286 e-value: 8.7E-11 score: 41.4 coord: 65..191 e-value: 1.6E-31 score: 109.0 |
IPR003582 | ShKT domain | SMART | SM00254 | ShKT | coord: 333..365 e-value: 45.0 score: 2.8 coord: 299..332 e-value: 0.013 score: 24.7 |
IPR003582 | ShKT domain | PFAM | PF01549 | ShK | coord: 299..331 e-value: 0.001 score: 19.2 coord: 333..365 e-value: 0.025 score: 14.8 |
IPR003582 | ShKT domain | PROSITE | PS51670 | SHKT | coord: 300..331 score: 8.419 |
IPR003582 | ShKT domain | PROSITE | PS51670 | SHKT | coord: 334..365 score: 8.015 |
IPR006026 | Peptidase, metallopeptidase | SMART | SM00235 | ZnMc | coord: 62..199 e-value: 4.8E-30 score: 115.8 |
IPR024079 | Metallopeptidase, catalytic domain | GENE3D | 3.40.390.10 | | coord: 64..286 e-value: 7.7E-57 score: 191.7 |
None | No IPR available | PANTHER | PTHR10127 | DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING | coord: 55..285 |
None | No IPR available | SUPERFAMILY | 55486 | Metalloproteases ("zincins"), catalytic domain | coord: 215..285 coord: 61..187 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000009545 ID=EMLSAP00000009545|Name=EMLSAP00000009545|organism=Lepeophtheirus salmonis|type=polypeptide|length=365bp MYTNQIIQRKSTAEHCEMMLLTIIATLLLTFHDVYSSVKHAECRIVYDKF HRQEMASRNFIAGAKWPNNEVPYEISSGYSSSDLDVIKSAMREIESKTCV KWVPRSGQKSFVLINPREDGCFAVLGYNPNRGMHVLNLQRSNGRSTCMIM GIAAHEMLHILGFAHEQTRPDRDQFVQIYWSRIKRDSISNYFRAIDINAR ERPPVCDPRSTQTSFDNCYSGFKTRTFGLEYDYGSIMHYGLDDFTTTGQD TMRVLRPVPTGIVIGNRKGMTNLDALKVKMRYDCNEDPEKKTTRKPSVEC KDIYRECPLYKNQCKTNQFIKDGCKVSCGECTECYDMYRNCPDMKHLCGE LDAITKGCKLTCRLC back to top
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