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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | GENE3D | 1.20.1640.10 | | coord: 308..456
e-value: 4.7E-16
score: 57.9 |
| None | No IPR available | PANTHER | PTHR10796 | PATCHED-RELATED | coord: 24..454 |
| None | No IPR available | PANTHER | PTHR10796:SF77 | SUBFAMILY NOT NAMED | coord: 24..454 |
| None | No IPR available | SUPERFAMILY | 82866 | Multidrug efflux transporter AcrB transmembrane domain | coord: 309..453 |
| None | No IPR available | TMHMM | TMhelix | | coord: 383..405 |
| None | No IPR available | TMHMM | TMhelix | | coord: 444..466 |
| None | No IPR available | TMHMM | TMhelix | | coord: 351..373 |
| None | No IPR available | TMHMM | TMhelix | | coord: 319..338 |
| IPR003392 | Patched | PFAM | PF02460 | Patched | coord: 271..454
e-value: 2.0E-29
score: 102.0 |
| IPR000731 | Sterol-sensing domain | PROSITE | PS50156 | SSD | coord: 318..473
score: 26.129 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000010036 ID=EMLSAP00000010036|Name=EMLSAP00000010036|organism=Lepeophtheirus salmonis|type=polypeptide|length=473bp
MGHQHCMRKNILLDSLEKAFYSFEYKMEKLWIPQNSEFISNKKWIEENFP
TNYRVQIISLLSLSGNILTPEALLLLLDIHEKVEQISAGHNTRWKDLCFK
VPVANVFLERNKVLTNDKNTTFDRVDDLFISDDNVVPQNEKTEIDYDDAF
LEYENESKNGSRYEKLLKILSPKVYCDFVETLNDRCFERSLLEIWKFDRR
RIKRLTKDRIVQAINRIQNSPVYGYKTNYDNYMGSIIRNETGHVVSASTL
NSVWFTQVNLENVSEVIGLTDEFVNKESLEWELKFVDIFLNASTENISAF
GISARSFNDITKKSIFFDGIRLTGGFFIMCIYTVIMLGRLNCVEVRFFAT
IAGLFSILLGMVVSLGIISAMGLKYSPVFAMLPFLYLGIGIDDMFIIVQC
WYNILEQNKKECSTDQSIKTLEEMMAETMKDAGVTITITSLTDIFAFGIG
GITVSQVIYVAFMYIPSFKKIVT back to top
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