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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR001330 | Prenyltransferase/squalene oxidase | PFAM | PF00432 | Prenyltrans | coord: 263..307
e-value: 5.7E-11
score: 41.6
coord: 220..258
e-value: 8.1E-10
score: 37.9 |
| None | No IPR available | PFAM | PF13249 | Prenyltrans_2 | coord: 82..187
e-value: 7.7E-14
score: 51.9 |
| None | No IPR available | GENE3D | 1.50.10.20 | | coord: 7..330
e-value: 4.4E-106
score: 354.7 |
| None | No IPR available | PANTHER | PTHR11774 | GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT | coord: 1..329 |
| IPR026873 | Geranylgeranyl transferase type-2 subunit beta | PANTHER | PTHR11774:SF5 | GERANYLGERANYL TRANSFERASE TYPE II BETA SUBUNIT | coord: 1..329 |
| IPR008930 | Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid | SUPERFAMILY | 48239 | Terpenoid cyclases/Protein prenyltransferases | coord: 10..329 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000010341 ID=EMLSAP00000010341|Name=EMLSAP00000010341|organism=Lepeophtheirus salmonis|type=polypeptide|length=338bp
MGVSTHDAKIPENAPTSLLTDLHRQFVAGYSTKDNYEYVMSEFLRINGIY
WSVTLMDLIDAKEDLGDPQEVFSYIKECFDPTSGGYRPAANHDSHILYTL
SAIQIAAIYDSMDIIPKAQVTKFISELQQADGSFWGDKWAEKDSRFSFCA
VAALKLLHPESPLSEFIHVDKAFKYVISCMNFDGGFGTRPGSESHAGNTY
CCTGFLSLTDNLHRIDADILGRWLAERQLPSGGVNGRPQKLPDVCYSWWV
LASLSIIGRLHWIDKKALSNFIYACQDSETGGISDRPGDYPDPFHTLFGM
AGLSLMGIDKNIIKEVNPVFCMPQSVIDKCGISIKTIV back to top
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