EMLSAP00000010397, EMLSAP00000010397 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000010397
Unique NameEMLSAP00000010397
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length556
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01705TSP1REPEATcoord: 497..508
score: 31.18
coord: 478..489
score: 44.49
coord: 232..245
score: 52.3
NoneNo IPR availableGENE3D2.20.100.10coord: 399..441
e-value: 5.1E-12
score: 45.3
coord: 344..390
e-value: 2.6E-13
score: 49.5
coord: 232..283
e-value: 9.1E-11
score: 41.3
coord: 285..337
e-value: 1.3E-16
score: 60.1
coord: 458..513
e-value: 2.3E-18
score: 65.7
coord: 515..554
e-value: 3.3E-12
score: 46.0
NoneNo IPR availablePANTHERPTHR19897COILED-COIL DOMAIN-CONTAINING PROTEINcoord: 232..554
NoneNo IPR availablePANTHERPTHR19897:SF72HEMICENTIN-1coord: 232..554
IPR000742Epidermal growth factor-like domainSMARTSM00181EGFcoord: 136..167
e-value: 0.0026
score: 27.0
coord: 108..135
e-value: 200.0
score: 1.1
coord: 170..200
e-value: 13.0
score: 14.7
coord: 43..74
e-value: 20.0
score: 12.5
coord: 75..105
e-value: 0.034
score: 23.3
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 167..200
score: 8.488
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 69..105
score: 7.63
IPR000884Thrombospondin, type 1 repeatSMARTSM00209TSP1coord: 462..514
e-value: 3.3E-15
score: 66.5
coord: 519..555
e-value: 0.0021
score: 27.3
coord: 234..284
e-value: 9.2E-8
score: 41.8
coord: 346..398
e-value: 4.3E-7
score: 39.6
coord: 403..457
e-value: 4.5E-6
score: 36.2
coord: 289..341
e-value: 2.7E-9
score: 46.9
IPR000884Thrombospondin, type 1 repeatPFAMPF00090TSP_1coord: 291..337
e-value: 1.4E-9
score: 37.8
coord: 463..513
e-value: 6.1E-13
score: 48.5
coord: 235..283
e-value: 4.7E-7
score: 29.7
coord: 520..554
e-value: 1.2E-10
score: 41.2
coord: 404..442
e-value: 2.6E-7
score: 30.5
coord: 347..389
e-value: 4.4E-8
score: 32.9
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 516..554
score: 10.688
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 459..514
score: 14.092
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 343..398
score: 10.085
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 231..284
score: 12.043
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 286..341
score: 12.717
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 400..457
score: 10.479
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 455..513
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 231..279
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 513..554
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 283..340
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 340..397
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 397..443
IPR013032EGF-like, conserved sitePFAMPF12661hEGFcoord: 122..134
e-value: 0.0025
score: 17.6
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 188..199
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 155..166
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 93..104
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 155..166
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 123..134
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 123..137
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 62..73
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 93..104
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 62..76
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 188..202

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000010397 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000010397EMLSAT00000010397-706244Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000010397 ID=EMLSAP00000010397|Name=EMLSAP00000010397|organism=Lepeophtheirus salmonis|type=polypeptide|length=556bp
MIFRGATVQFIYYLSNKYTCDSIGNVICLPGWSQPEHLCETPVCSIEGRS
CVNGECIFPNVCSCEIGWDGPSCAECIPLAGCQHGSCKGALECNCEPGWX
GGQCEKPKCNDCVNGCCHEPNKCICDPGWQGINCTECETLSNCINGKCFK
KPFECVCNPGWKGNGCAEPICRDTCHPENGYCQRPGECICKHGWXGRDCT
ECVPYPDCNGTCVNNVPWTCTDLGTDNEAKPGQWSLWSTWSSCSKSCGDG
EQRRDRTCGNGERSQQNCVGQSSQGQSCVIANCKIDGEWARWTRWSPCST
SCGTGFRSRSRACSDPIPRYGGNRCSGSPTETVKCFSTFCPIAGRWSSWQ
ZWGQLSVSCGEGTRQRQRRCDSPAPAHRGASCIGESSQTNTLFIKECPVD
AEWSLWSRWTACSKSCDRGQKSRMRHCGEPLFGGQSCPGNITIEKDVIDC
WVRQVCTVDGKWSNWLEWSSCTVTCGGGTRQRRRNCDNPAPKFGGQRCLG
SEFDTQNCETDSCPIDGRWSQWRQWSQCSKTCGSGSQKRERVCNNPRFGG
KACTVW
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