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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 596..617 |
None | No IPR available | GENE3D | 3.30.1370.50 | | coord: 98..158 e-value: 1.3E-8 score: 33.6 |
None | No IPR available | GENE3D | 3.30.200.20 | | coord: 248..292 e-value: 1.6E-14 score: 53.3 |
None | No IPR available | GENE3D | 1.10.510.10 | | coord: 293..494 e-value: 9.1E-63 score: 210.7 |
None | No IPR available | PANTHER | PTHR24362:SF106 | SERINE/THREONINE-PROTEIN KINASE NEK1 | coord: 248..636 |
None | No IPR available | PANTHER | PTHR24362 | SERINE/THREONINE-PROTEIN KINASE NEK | coord: 248..636 |
None | No IPR available | SUPERFAMILY | 82708 | R3H domain | coord: 95..180 |
None | No IPR available | TMHMM | TMhelix | | coord: 4..23 |
None | No IPR available | TMHMM | TMhelix | | coord: 30..52 |
IPR002290 | Serine/threonine- /dual specificity protein kinase, catalytic domain | SMART | SM00220 | S_TKc | coord: 222..482 e-value: 1.1E-70 score: 250.9 |
IPR001374 | Single-stranded nucleic acid binding R3H | SMART | SM00393 | R3H | coord: 83..157 e-value: 1.3E-6 score: 38.0 |
IPR001374 | Single-stranded nucleic acid binding R3H | PFAM | PF01424 | R3H | coord: 96..157 e-value: 6.6E-14 score: 51.2 |
IPR001374 | Single-stranded nucleic acid binding R3H | PROSITE | PS51061 | R3H | coord: 93..157 score: 10.627 |
IPR000719 | Protein kinase domain | PFAM | PF00069 | Pkinase | coord: 249..481 e-value: 1.5E-61 score: 207.7 |
IPR000719 | Protein kinase domain | PROSITE | PS50011 | PROTEIN_KINASE_DOM | coord: 222..482 score: 43.241 |
IPR008271 | Serine/threonine-protein kinase, active site | PROSITE | PS00108 | PROTEIN_KINASE_ST | coord: 348..360 |
IPR011009 | Protein kinase-like domain | SUPERFAMILY | 56112 | Protein kinase-like (PK-like) | coord: 250..520 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000010815 ID=EMLSAP00000010815|Name=EMLSAP00000010815|organism=Lepeophtheirus salmonis|type=polypeptide|length=859bp MEAYLIFITIFTFCSMSLYFDFLYEVSLNLAFTLFIFAFVNWTALITMDL LGSILGSMNGPPQTVLSEKEKERRKRQKVYQEKLLEKRRVEMEAFRSKME KDVEKFLKECLSEKSKTFPTMNQYHRSILKDVCEVAGLVAYSFGEEEVNR HIVVWKQEFAPSEEELACHRRGEKYDPQEIERRKVILKAQEVQERKEDTK SKPSQEPKVSYLDKFKGLIETGNPEAVNAKKSYGMVSAESKKDKRTVEEN ENSYVMKEIKTSQFNEKEREDVSQEVDLLSRLNHSNIVSYYESFSERNCF YIIMEYCELGDLYTKINRQRGKLFPETLILGYFVQICRAVEYIHERKILH RDIKSQNILISKNRVCKLGDFGIARIIDGTTDYAKTCVGTPYYLSPEVWE NKPYNNKSDLWALGCVLYEMTTLKHAFEAGCMKNLILKIIRGSYPPISPT YTYDLRNLIQALLRKKASDRPSLTSIFRKGFIKKAEQDNLRSLSTHKKIS KSSGTISSTQSRVQSGLSRPKSSVVNNKSNPTPKVNLNHKKLTKPSKTPV KQSDDTFTLRVGGNKELSFKNGFPFVQLEEKPANNNTKVNPEPENASKAE EESERIRKRKEIISERRRKLQSVRESNKNNSGVMWIDFSDSKSETNTISD GDERLHQNDTFVVPINDISGEETVPEGVNEERGGGVLKVFKKFICTANEG STVFENHETLKKDSTHSIEETTEVQEYTNDYRSQSLPAYHPYYRKPREEF REIQLERPDSSDEIWDLSSIPKTPSASFRKTDDIFSTLEGQRAYLERRVG VDNLLTVYKLISNCVSDTDDDKQLHIMDFQKILGKGNETLIDDIVQLVVA DQFFQNFEE back to top
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